myRT

myRT report for GCA_002704825.1_ASM270482v1

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Seq: PAIY01000131.1 Phycisphaeraceae bacterium isolate NAT22 MHASMcontig_914782, whole genome shotgun sequence (38423 bp)
Overview 1 RT 1: 5357-9180 bp Neighborhood of RT #1 [5357, 9180] RVT-GII KOG4768 Phage_tail_2 Feature: gene Location: 5357-5785 bp Feature: gene Location: 5798-5947 bp Feature: gene Location: 6634-8310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6952-7627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6952-7627 bp Feature: domain Description: KOG4768 Location: 7768-8302 bp Feature: domain Description: KOG4768 Location: 7768-8302 bp Feature: gene Location: 8381-8701 bp Feature: domain Description: Phage_tail_2 Location: 8414-8669 bp Feature: domain Description: Phage_tail_2 Location: 841 4-8669 bp Feature: gene Location: 8764-9180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), Phage_tail_2 (pfam06199)

Seq: PAIY01000205.1 Phycisphaeraceae bacterium isolate NAT22 MHASMcontig_963672, whole genome shotgun sequence (53958 bp)
Overview 1 RT 1: 8072-16116 bp Neighborhood of RT #1 [8072, 16127] ParB_N_like_MT RVT-GII GIIM HNH Mod Mod COG3587 Feature: gene Location: 8072-8335 bp Feature: gene Location: 8430-9044 bp Feature: domain Description: ParB_N_like_MT Location: 8451-8703 bp Feature: domain Description: ParB_N_like_MT Location: 8451-8703 bp Feature: gene Location: 9710-11386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10028-10700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1002 8-10700 bp Feature: domain Description: GIIM Note: maturase Location: 10772-10955 bp Feature: domain Description: GIIM Note: maturase Location: 10772 -10955 bp Feature: domain Description: HNH Note: nucleases Location: 11228-11372 bp Feature: domain Description: HNH Note: nucleases Location: 112 2 8-11372 bp Feature: gene Location: 11370-13061 bp Feature: domain Description: Mod Location: 11481-11910 bp Feature: domain Description: Mod Location: 11481-11910 bp Feature: domain Description: Mod Location: 12258-12462 bp Feature: domain Description: Mod Location: 12 2 58-12 462 bp Feature: gene Location: 13065-16127 bp Feature: domain Description: COG3587 Location: 13089-16116 bp Feature: domain Description: COG3587 Location: 13089-16116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mod (COG2189), COG3587 (Restriction endonuclease ), ParB_N_like_MT (cd16844), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: PAIY01000242.1 Phycisphaeraceae bacterium isolate NAT22 MHASMcontig_986697, whole genome shotgun sequence (34083 bp)
Overview 1 RT 1: 4754-10530 bp Neighborhood of RT #1 [4754, 10530] gnd RVT-Retrons Feature: gene Location: 4754-6295 bp Feature: gene Location: 6410-7978 bp Feature: domain Description: gnd Location: 6482-7949 bp Feature: domain Description: gnd Location: 6482-7949 bp Feature: gene Location: 8301-9317 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8574-9138 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8574-913 8 bp Feature: gene Location: 9336-10226 bp Feature: gene Location: 10333-10530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gnd (TIGR00873), RVT-Retrons