myRT

myRT report for GCA_002705825.1_ASM270582v1

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Seq: NKQX01000001.1 Mycobacterium kansasii strain K19 Scaffold_1, whole genome shotgun sequence (6518727 bp)
Overview 1 RT 1: 5404109-5411843 bp Neighborhood of RT #1 [5404109, 5411843] PRK03381 SSL2 RVT-GII GIIM Germane Gmad2 Feature: gene Location: 5404109-5406556 bp Feature: domain Description: PRK03381 Location: 5404139-5406500 bp Feature: domain Description: PRK03381 Location: 54041 39-5406500 bp Feature: gene Location: 5406570-5408291 bp Feature: domain Description: SSL2 Location: 5406609-5407989 bp Feature: domain Description: SSL2 Location: 5406609-5407989 bp Feature: gene Location: 5409145-5410518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5409496-5410120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5409496-541 01 20 bp Feature: domain Description: GIIM Note: maturase Location: 5410213-5410426 bp Feature: domain Description: GIIM Note: maturase Location: 541 021 3-541 0426 bp Feature: gene Location: 5410736-5411578 bp Feature: domain Description: Germane Location: 5410895-5411237 bp Feature: domain Description: Germane Location: 541 0895-541 1 237 bp Feature: domain Description: Gmad2 Location: 5411288-5411543 bp Feature: domain Description: Gmad2 Location: 541 1 288-541 1 543 bp Feature: gene Location: 5411682-5411843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03381 (PII uridylyl-transferase; Provisional), SSL2 (COG1061), RVT-GII, GIIM (pfam08388), Germane (smart00909), Gmad2 (pfam10648)

Seq: NKQX01000105.1 Mycobacterium kansasii strain K19 Scaffold_166, whole genome shotgun sequence (1944 bp)
Overview 1 RT 1: 594-1782 bp Neighborhood of RT #1 [594, 1856] RVT-GII GIIM Feature: gene Location: 594-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-1470 bp Feature: domain Description: GIIM Note: maturase Location: 1554-1782 bp Feature: domain Description: GIIM Note: maturase Location: 1554-1782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NKQX01000044.1 Mycobacterium kansasii strain K19 Scaffold_60, whole genome shotgun sequence (1723 bp)
Overview 1 RT 1: 3-1721 bp Neighborhood of RT #1 [3, 1721] PRK06526 RVT-GII GIIM Feature: gene Location: 3-509 bp Feature: domain Description: PRK06526 Location: 60-498 bp Feature: domain Description: PRK06526 Location: 60-498 bp Feature: gene Location: 654-995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 672-798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 672-798 bp Feature: domain Description: GIIM Note: maturase Location: 867-978 bp Feature: domain Description: GIIM Note: maturase Location: 867-978 bp Feature: gene Location: 1515-1721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06526 (transposase; Provisional), RVT-GII, GIIM (pfam08388)