myRT

myRT report for GCA_002705965.1_ASM270596v1

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Seq: NKRC01000001.1 Mycobacterium kansasii strain 49_11 Scaffold_1, whole genome shotgun sequence (5899391 bp)
Overview 1 RT 1: 3460968-3467454 bp Neighborhood of RT #1 [3460968, 3467454] PAP2_like_4 LCB5 STKc_PknB_like RVT_N RVT-GII Feature: gene Location: 3460968-3462464 bp Feature: domain Description: PAP2_like_4 Location: 3461028-3461520 bp Feature: domain Description: PAP2_like_4 Location: 3461 028-3461 520 bp Feature: domain Description: LCB5 Location: 3461610-3462450 bp Feature: domain Description: LCB5 Location: 3461 61 0-3462450 bp Feature: gene Location: 3462501-3464396 bp Feature: domain Description: STKc_PknB_like Location: 3462534-3463326 bp Feature: domain Description: STKc_PknB_like Location: 3462534-3463326 bp Feature: gene Location: 3464836-3465657 bp Feature: domain Description: RVT_N Location: 3464926-3465163 bp Feature: domain Description: RVT_N Location: 3464926-34651 63 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3465223-3465568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3465223-3465568 bp Feature: gene Location: 3466286-3466795 bp Feature: gene Location: 3467185-3467454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAP2_like_4 (cd03395), LCB5 (COG1597), STKc_PknB_like (cd14014), RVT_N (pfam13655), RVT-GII

Seq: NKRC01000893.1 Mycobacterium kansasii strain 49_11 Scaffold_1054, whole genome shotgun sequence (724 bp)
Overview 1 RT 1: 296-719 bp Neighborhood of RT #1 [296, 721] RVT-GII Feature: gene Location: 296-721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 506-719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 506-719 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NKRC01000956.1 Mycobacterium kansasii strain 49_11 Scaffold_1129, whole genome shotgun sequence (1090 bp)
Overview 1 RT 1: 2-822 bp Neighborhood of RT #1 [2, 1001] InsE RVT-GII GIIM Feature: gene Location: 2-295 bp Feature: domain Description: InsE Location: 44-281 bp Feature: domain Description: InsE Location: 44-281 bp Feature: gene Location: 333-1001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 90-525 bp Feature: domain Description: GIIM Note: maturase Location: 588-822 bp Feature: domain Description: GIIM Note: maturase Location: 588-822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388)

Seq: NKRC01000997.1 Mycobacterium kansasii strain 49_11 Scaffold_1179, whole genome shotgun sequence (267 bp)
Overview 1 RT 1: 1-184 bp Neighborhood of RT #1 [1, 264] RVT-GII Feature: gene Location: 1-264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 -184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NKRC01001212.1 Mycobacterium kansasii strain 49_11 Scaffold_1436, whole genome shotgun sequence (1943 bp)
Overview 1 RT 1: 594-1782 bp Neighborhood of RT #1 [594, 1856] RVT-GII GIIM Feature: gene Location: 594-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-1470 bp Feature: domain Description: GIIM Note: maturase Location: 1554-1782 bp Feature: domain Description: GIIM Note: maturase Location: 15 5 4-1782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NKRC01000328.1 Mycobacterium kansasii strain 49_11 Scaffold_371, whole genome shotgun sequence (456 bp)
Overview 1 RT 1: 1-454 bp Neighborhood of RT #1 [1, 453] RVT-GII Feature: gene Location: 1-453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NKRC01000390.1 Mycobacterium kansasii strain 49_11 Scaffold_446, whole genome shotgun sequence (2932 bp)
Overview 1 RT 1: 3-2931 bp Neighborhood of RT #1 [3, 2931] RVT_N RVT-GII GIIM Feature: gene Location: 3-1589 bp Feature: domain Description: RVT_N Location: 60-297 bp Feature: domain Description: RVT_N Location: 60-297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 357-1023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 357 -1023 bp Feature: domain Description: GIIM Note: maturase Location: 1074-1308 bp Feature: domain Description: GIIM Note: maturase Location: 107 4-1308 bp Feature: gene Location: 2221-2931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: NKRC01000514.1 Mycobacterium kansasii strain 49_11 Scaffold_593, whole genome shotgun sequence (4175 bp)
Overview 1 RT 1: 215-3841 bp Neighborhood of RT #1 [215, 4029] RVT_N RVT-GII GIIM Transposase_mut Feature: gene Location: 215-2203 bp Feature: domain Description: RVT_N Location: 452-689 bp Feature: domain Description: RVT_N Location: 452-68 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 749-1412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 749-1412 bp Feature: domain Description: GIIM Note: maturase Location: 1478-1712 bp Feature: domain Description: GIIM Note: maturase Location: 1478 -1712 bp Feature: gene Location: 2719-4029 bp Feature: domain Description: Transposase_mut Location: 2797-3841 bp Feature: domain Description: Transposase_mut Location: 2797-38 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872)

Seq: NKRC01000748.1 Mycobacterium kansasii strain 49_11 Scaffold_881, whole genome shotgun sequence (3054 bp)
Overview 1 RT 1: 86-3053 bp Neighborhood of RT #1 [86, 3053] RVT_N RVT-GII DDE_Tnp_1_assoc DDE_Tnp_1 Feature: gene Location: 86-1012 bp Feature: domain Description: RVT_N Location: 194-440 bp Feature: domain Description: RVT_N Location: 19 4-440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491-998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49 1-9 9 8 bp Feature: gene Location: 1614-2648 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 1719-1983 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 1719 -19 83 bp Feature: domain Description: DDE_Tnp_1 Location: 2010-2583 bp Feature: domain Description: DDE_Tnp_1 Location: 2010-2583 bp Feature: gene Location: 2712-3053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, DDE_Tnp_1_assoc (pfam13808), DDE_Tnp_1 (pfam01609)