myRT

myRT report for GCA_002705975.1_ASM270597v1

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Seq: AQRJ01000032.1 Streptomyces sp. AmelKG-E11A YW7DRAFT_scaffold00029.29_C, whole genome shotgun sequence (123934 bp)
Overview 1 RT 1: 99513-108235 bp Neighborhood of RT #1 [99513, 108240] Disaggr_repeat CBM6-CBM35-CBM36_like_2 Disaggr_repeat Disaggr_repeat RVT-Retrons RVT-Retrons Peptidase_M78 CspC Feature: gene Location: 99513-102605 bp Feature: domain Description: Disaggr_repeat Location: 100467-100722 bp Feature: domain Description: Disaggr_repeat Location: 1 00467-1 00722 bp Feature: domain Description: CBM6-CBM35-CBM36_like_2 Location: 100755-101142 bp Feature: domain Description: CBM6-CBM35-CBM36_like_2 Location: 1 00755-1 01 1 42 bp Feature: domain Description: Disaggr_repeat Location: 101181-101280 bp Feature: domain Description: Disaggr_repeat Location: 1 01 1 81 -1 01 280 bp Feature: domain Description: Disaggr_repeat Location: 101997-102216 bp Feature: domain Description: Disaggr_repeat Location: 1 01 997-1 0221 6 bp Feature: gene Location: 102760-102924 bp Feature: gene Location: 103843-105960 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103939-104197 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 03939-1 041 97 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 104434-104707 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 04434-1 04707 bp Feature: domain Description: Peptidase_M78 Location: 105586-105787 bp Feature: domain Description: Peptidase_M78 Location: 1 05586-1 05787 bp Feature: gene Location: 107492-107632 bp Feature: gene Location: 108037-108240 bp Feature: domain Description: CspC Location: 108040-108235 bp Feature: domain Description: CspC Location: 1 08040-1 08235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Peptidase_M78 (pfam06114), CspC (COG1278)

Seq: AQRJ01000055.1 Streptomyces sp. AmelKG-E11A YW7DRAFT_scaffold00010.10_C, whole genome shotgun sequence (286883 bp)
Overview 1 RT 1: 273682-278541 bp Neighborhood of RT #1 [273682, 278541] DDE_Tnp_1 RVT-GII Intron_maturas2 HNHc MhpC Feature: gene Location: 273682-274008 bp Feature: domain Description: DDE_Tnp_1 Location: 273688-273856 bp Feature: domain Description: DDE_Tnp_1 Location: 2 73688-2 73856 bp Feature: gene Location: 274722-275003 bp Feature: gene Location: 275103-276248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275109-275523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 75109-2 7552 3 bp Feature: domain Description: Intron_maturas2 Location: 275640-275853 bp Feature: domain Description: Intron_maturas2 Location: 2 75640-2 75853 bp Feature: domain Description: HNHc Note: nucleases Location: 276045-276204 bp Feature: domain Description: HNHc Note: nucleases Location: 2 76045-2 762 04 bp Feature: gene Location: 276615-277346 bp Feature: domain Description: MhpC Location: 276633-277329 bp Feature: domain Description: MhpC Location: 2 76633-2 7732 9 bp Feature: gene Location: 278242-278541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), MhpC (COG0596)