myRT

myRT report for GCA_002706685.1_ASM270668v1

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Seq: PALV01000011.1 Gammaproteobacteria bacterium isolate SAT35 MHASMcontig_706639, whole genome shotgun sequence (567093 bp)
Overview 1 RT 1: 102029-107808 bp Neighborhood of RT #1 [102029, 107810] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM ligand_gated_channel Feature: gene Location: 102029-103528 bp Feature: domain Description: LZ_Tnp_IS66 Location: 102254-102473 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 02254-1 02473 bp Feature: domain Description: zf-IS66 Location: 102494-102620 bp Feature: domain Description: zf-IS66 Location: 1 02494-1 02620 bp Feature: domain Description: DDE_Tnp_IS66 Location: 102662-103487 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 02662-1 03487 bp Feature: gene Location: 103736-103918 bp Feature: gene Location: 103986-105224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104190-104847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 041 90-1 04847 bp Feature: domain Description: GIIM Note: maturase Location: 104925-105147 bp Feature: domain Description: GIIM Note: maturase Location: 1 04925-1 051 47 bp Feature: gene Location: 105250-105423 bp Feature: gene Location: 105561-107810 bp Feature: domain Description: ligand_gated_channel Location: 105693-107808 bp Feature: domain Description: ligand_gated_channel Location: 1 05693-1 07808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), ligand_gated_channel (cd01347)

Seq: PALV01000013.1 Gammaproteobacteria bacterium isolate SAT35 MHASMcontig_708517, whole genome shotgun sequence (288863 bp)
Overview 1 RT 1: 47488-54535 bp Neighborhood of RT #1 [47488, 54570] Peptidases_S8_Subtilisin_like_2 SpoVK RVT-Retrons RMtype1_S_EcoKI-TRD2-CR2_like RMtype1_S_EcoKI-TRD2-CR2_like Feature: gene Location: 47488-49992 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 48340-49261 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 48340-492 61 bp Feature: gene Location: 50016-51017 bp Feature: domain Description: SpoVK Location: 50256-50946 bp Feature: domain Description: SpoVK Location: 502 56-50946 bp Feature: gene Location: 51145-52644 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51841-52393 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51841-52 393 bp Feature: gene Location: 52641-53216 bp Feature: gene Location: 53263-54570 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 53683-53827 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2 -CR2 _like Location: 53683-5382 7 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 53968-54535 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2 -CR2 _like Location: 53968-54535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidases_S8_Subtilisin_like_2 (cd04847), SpoVK (COG0464), RVT-Retrons, RMtype1_S_EcoKI-TRD2-CR2_like (cd17261)