myRT

myRT report for GCA_002709345.1_ASM270934v1

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Seq: PAQP01000001.1 Pseudomonas sp. isolate SP133 88109, whole genome shotgun sequence (138524 bp)
Overview 1 RT 1: 130105-136804 bp Neighborhood of RT #1 [130105, 136821] Fdh-alpha IS5 RVT-GII GIIM IS5 BaeS CheY Feature: gene Location: 130105-130830 bp Feature: domain Description: Fdh-alpha Location: 130111-130753 bp Feature: domain Description: Fdh-alpha Location: 1 301 1 1 -1 30753 bp Feature: gene Location: 132018-132476 bp Feature: domain Description: IS5 Location: 132021-132444 bp Feature: domain Description: IS5 Location: 1 32021 -1 32444 bp Feature: gene Location: 132548-133816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132761-133418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 32761 -1 3341 8 bp Feature: domain Description: GIIM Note: maturase Location: 133496-133718 bp Feature: domain Description: GIIM Note: maturase Location: 1 33496-1 3371 8 bp Feature: gene Location: 134309-134848 bp Feature: domain Description: IS5 Location: 134507-134825 bp Feature: domain Description: IS5 Location: 1 34507-1 34825 bp Feature: gene Location: 135028-136821 bp Feature: domain Description: BaeS Location: 135409-136393 bp Feature: domain Description: BaeS Location: 1 35409-1 36393 bp Feature: domain Description: CheY Location: 136450-136804 bp Feature: domain Description: CheY Location: 1 36450-1 36804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fdh-alpha (TIGR01591), IS5 (COG3039), RVT-GII, GIIM (pfam08388), BaeS (COG0642), CheY (COG0784)

Seq: PAQP01000043.1 Pseudomonas sp. isolate SP133 MHASMcontig_3416579, whole genome shotgun sequence (52298 bp)
Overview 1 RT 1: 47902-51876 bp Neighborhood of RT #1 [47902, 52070] mtnA DDE_Tnp_1 RVT-GII GIIM DUF772 Feature: gene Location: 47902-48978 bp Feature: domain Description: mtnA Location: 47932-48964 bp Feature: domain Description: mtnA Location: 47932 -48964 bp Feature: gene Location: 49240-49698 bp Feature: domain Description: DDE_Tnp_1 Location: 49243-49648 bp Feature: domain Description: DDE_Tnp_1 Location: 492 43-49648 bp Feature: gene Location: 49770-51038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49983-50640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49983-50640 bp Feature: domain Description: GIIM Note: maturase Location: 50718-50940 bp Feature: domain Description: GIIM Note: maturase Location: 50718-50940 bp Feature: gene Location: 51531-52070 bp Feature: domain Description: DUF772 Location: 51681-51876 bp Feature: domain Description: DUF772 Location: 51681-51876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mtnA (PRK05720), DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598)