myRT

myRT report for GCA_002710625.1_ASM271062v1

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Seq: PAKR01000060.1 Alcanivorax sp. isolate SAT63 331655, whole genome shotgun sequence (76022 bp)
Overview 1 RT 1: 20-2978 bp Neighborhood of RT #1 [20, 3106] RVT-GII GIIM PBP2_TRAP_DctP_like_1 Feature: gene Location: 20-1396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332-950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332-950 bp Feature: domain Description: GIIM Note: maturase Location: 998-1229 bp Feature: domain Description: GIIM Note: maturase Location: 998-1 229 bp Feature: gene Location: 1638-1898 bp Feature: gene Location: 1946-3106 bp Feature: domain Description: PBP2_TRAP_DctP_like_1 Location: 2036-2978 bp Feature: domain Description: PBP2_TRAP_DctP_like_1 Location: 2036-2978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_TRAP_DctP_like_1 (cd13666), RVT-GII, GIIM (pfam08388)

Seq: PAKR01000077.1 Alcanivorax sp. isolate SAT63 MHASMcontig_2124517, whole genome shotgun sequence (45056 bp)
Overview 1 RT 1: 41763-45054 bp Neighborhood of RT #1 [41763, 45054] Tra5 PRK03573 RVT-GII GIIM Feature: gene Location: 41763-42497 bp Feature: domain Description: Tra5 Location: 41772-42441 bp Feature: domain Description: Tra5 Location: 41772 -42 441 bp Feature: gene Location: 42680-43126 bp Feature: domain Description: PRK03573 Location: 42725-43118 bp Feature: domain Description: PRK03573 Location: 42 72 5-43118 bp Feature: gene Location: 43362-44723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43689-44301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43689-44301 bp Feature: domain Description: GIIM Note: maturase Location: 44361-44577 bp Feature: domain Description: GIIM Note: maturase Location: 44361-44577 bp Feature: gene Location: 44752-45054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), PRK03573 (transcriptional regulator SlyA; Provisional), RVT-GII, GIIM (pfam08388)

Seq: PAKR01000089.1 Alcanivorax sp. isolate SAT63 MHASMcontig_2177372, whole genome shotgun sequence (86079 bp)
Overview 1 RT 1: 28074-32255 bp 2 RT 2: 56831-59680 bp Neighborhood of RT #1 [28074, 32255] gp18 RVT-DGRs Avd_like Neighborhood of RT #2 [56831, 59680] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 28074-28877 bp Feature: domain Description: gp18 Location: 28086-28872 bp Feature: domain Description: gp18 Location: 28086-28872 bp Feature: gene Location: 28881-29420 bp Feature: gene Location: 29339-30466 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29549-30176 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29549-3 0176 bp Feature: gene Location: 30747-31148 bp Feature: domain Description: Avd_like Location: 30774-31071 bp Feature: domain Description: Avd_like Location: 3 0774-3 1071 bp Feature: gene Location: 31200-32255 bp Feature: gene Location: 56831-57448 bp Feature: domain Description: DUF1566 Location: 57188-57422 bp Feature: domain Description: DUF1566 Location: 57188-57422 bp Feature: gene Location: 57491-57847 bp Feature: domain Description: Avd_like Location: 57518-57824 bp Feature: domain Description: Avd_like Location: 57518-57824 bp Feature: gene Location: 57844-59232 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 58318-59005 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 583 18-59005 bp Feature: gene Location: 59229-59486 bp Feature: gene Location: 59483-59680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gp18 (COG4672), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)