myRT

myRT report for GCA_002711825.1_ASM271182v1

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Seq: PASE01000008.1 Muricauda sp. isolate SAT19 259729, whole genome shotgun sequence (40098 bp)
Overview 1 RT 1: 11851-17700 bp Neighborhood of RT #1 [11851, 17700] AAA_23 RVT-Retrons DUF2971 Feature: gene Location: 11851-13545 bp Feature: domain Description: AAA_23 Location: 11911-12616 bp Feature: domain Description: AAA_23 Location: 1 1 91 1 -1 261 6 bp Feature: gene Location: 13679-14956 bp Feature: gene Location: 15126-16223 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15348-15972 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 5348-1 5972 bp Feature: gene Location: 16365-17378 bp Feature: domain Description: DUF2971 Location: 16644-16872 bp Feature: domain Description: DUF2971 Location: 1 6644-1 6872 bp Feature: gene Location: 17455-17700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), RVT-Retrons, DUF2971 (pfam11185)

Seq: PASE01000144.1 Muricauda sp. isolate SAT19 329518, whole genome shotgun sequence (29266 bp)
Overview 1 RT 1: 11254-21838 bp Neighborhood of RT #1 [11254, 21838] RVT-UG5 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 11254-14649 bp Feature: gene Location: 14971-15897 bp Feature: gene Location: 15989-19201 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 16526-16988 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1652 6-16988 bp Feature: gene Location: 19632-20876 bp Feature: domain Description: Arm-DNA-bind_5 Location: 19698-19923 bp Feature: domain Description: Arm-DNA-bind_5 Location: 19698-1992 3 bp Feature: domain Description: Phage_int_SAM_5 Location: 19959-20280 bp Feature: domain Description: Phage_int_SAM_5 Location: 19959-2 02 80 bp Feature: domain Description: INTN1_C_like Location: 20325-20805 bp Feature: domain Description: INTN1_C_like Location: 2 032 5-2 0805 bp Feature: gene Location: 21140-21838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)