myRT

myRT report for GCA_002715125.1_ASM271512v1

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Seq: PAYC01000009.1 Idiomarinaceae bacterium isolate SAT112 194520, whole genome shotgun sequence (50980 bp)
Overview 1 RT 1: 82-2112 bp Neighborhood of RT #1 [82, 2112] RVT-GII GIIM Feature: gene Location: 82-1353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295-916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295-91 6 bp Feature: domain Description: GIIM Note: maturase Location: 964-1183 bp Feature: domain Description: GIIM Note: maturase Location: 964-1 1 83 bp Feature: gene Location: 1593-1745 bp Feature: gene Location: 1906-2112 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PAYC01000017.1 Idiomarinaceae bacterium isolate SAT112 194746, whole genome shotgun sequence (65174 bp)
Overview 1 RT 1: 3-8081 bp Neighborhood of RT #1 [3, 8104] RVT-GII GIIM gltB gltD_gamma_fam Feature: gene Location: 3-470 bp Feature: gene Location: 354-506 bp Feature: gene Location: 680-2017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 959-1580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 959-1580 bp Feature: domain Description: GIIM Note: maturase Location: 1628-1847 bp Feature: domain Description: GIIM Note: maturase Location: 162 8-1847 bp Feature: gene Location: 2202-6668 bp Feature: domain Description: gltB Location: 2208-6651 bp Feature: domain Description: gltB Location: 2 2 08-6651 bp Feature: gene Location: 6668-8104 bp Feature: domain Description: gltD_gamma_fam Location: 6686-8081 bp Feature: domain Description: gltD_gamma_fam Location: 6686-8081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gltB (PRK11750), gltD_gamma_fam (TIGR01318), RVT-GII, GIIM (pfam08388)

Seq: PAYC01000018.1 Idiomarinaceae bacterium isolate SAT112 194776, whole genome shotgun sequence (56539 bp)
Overview 1 RT 1: 52735-56537 bp Neighborhood of RT #1 [52735, 56537] PRK11036 MmsB RVT-GII GIIM Feature: gene Location: 52735-53514 bp Feature: domain Description: PRK11036 Location: 52765-53497 bp Feature: domain Description: PRK1103 6 Location: 52765-53 497 bp Feature: gene Location: 53511-54380 bp Feature: domain Description: MmsB Location: 53523-54372 bp Feature: domain Description: MmsB Location: 53 523 -543 72 bp Feature: gene Location: 54525-55796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54738-55359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5473 8-553 59 bp Feature: domain Description: GIIM Note: maturase Location: 55407-55626 bp Feature: domain Description: GIIM Note: maturase Location: 55407-55626 bp Feature: gene Location: 56070-56537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11036 (tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM), MmsB (COG2084), RVT-GII, GIIM (pfam08388)

Seq: PAYC01000024.1 Idiomarinaceae bacterium isolate SAT112 195022, whole genome shotgun sequence (97484 bp)
Overview 1 RT 1: 4597-10821 bp Neighborhood of RT #1 [4597, 10877] Lipase_3 RVT-Retrons DEXQc_UvrD DEXQc_UvrD UvrD Feature: gene Location: 4597-5658 bp Feature: domain Description: Lipase_3 Location: 4978-5437 bp Feature: domain Description: Lipase_3 Location: 4 978-54 37 bp Feature: gene Location: 5827-6222 bp Feature: gene Location: 6431-7531 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6623-7265 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6623-7265 bp Feature: gene Location: 7761-9044 bp Feature: gene Location: 9117-10877 bp Feature: domain Description: DEXQc_UvrD Location: 9135-9402 bp Feature: domain Description: DEXQc_UvrD Location: 9135-94 02 bp Feature: domain Description: DEXQc_UvrD Location: 9621-9984 bp Feature: domain Description: DEXQc_UvrD Location: 9621-9984 bp Feature: domain Description: UvrD Location: 10641-10821 bp Feature: domain Description: UvrD Location: 1064 1-10821 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lipase_3 (pfam01764), RVT-Retrons, DEXQc_UvrD (cd17932), UvrD (COG0210)

Seq: PAYC01000032.1 Idiomarinaceae bacterium isolate SAT112 195493, whole genome shotgun sequence (15065 bp)
Overview 1 RT 1: 82-5111 bp Neighborhood of RT #1 [82, 5119] RVT-GII GIIM PRK09290 ccoG_rdxA_fixG Feature: gene Location: 82-693 bp Feature: gene Location: 577-729 bp Feature: gene Location: 903-2240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1182-1803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1182-1803 bp Feature: domain Description: GIIM Note: maturase Location: 1851-2070 bp Feature: domain Description: GIIM Note: maturase Location: 185 1-2070 bp Feature: gene Location: 2384-3616 bp Feature: domain Description: PRK09290 Location: 2396-3611 bp Feature: domain Description: PRK09290 Location: 2396-3611 bp Feature: gene Location: 3683-5119 bp Feature: domain Description: ccoG_rdxA_fixG Location: 3824-5111 bp Feature: domain Description: ccoG_rdxA_fixG Location: 3824-5 111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09290 (allantoate amidohydrolase; Reviewed), ccoG_rdxA_fixG (TIGR02745), RVT-GII, GIIM (pfam08388)