myRT

myRT report for GCA_002719735.1_ASM271973v1

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Seq: PBEO01000020.1 Alcanivorax sp. isolate sp32 169227, whole genome shotgun sequence (170151 bp)
Overview 1 RT 1: 73818-78017 bp 2 RT 2: 81940-86666 bp Neighborhood of RT #1 [73818, 78022] Tra5 PRK03573 RVT-GII GIIM PRK05995 Neighborhood of RT #2 [81940, 86794] GstA MhpC RVT-GII GIIM PBP2_TRAP_DctP_like_1 Feature: gene Location: 73818-74552 bp Feature: domain Description: Tra5 Location: 73827-74496 bp Feature: domain Description: Tra5 Location: 73827-74496 bp Feature: gene Location: 74735-75181 bp Feature: domain Description: PRK03573 Location: 74780-75173 bp Feature: domain Description: PRK03573 Location: 74780-751 73 bp Feature: gene Location: 75417-76778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75744-76356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75744-76356 bp Feature: domain Description: GIIM Note: maturase Location: 76416-76632 bp Feature: domain Description: GIIM Note: maturase Location: 7641 6-76632 bp Feature: gene Location: 76604-77191 bp Feature: gene Location: 77240-78022 bp Feature: domain Description: PRK05995 Location: 77255-78017 bp Feature: domain Description: PRK05995 Location: 77255-7801 7 bp Feature: gene Location: 81940-82584 bp Feature: domain Description: GstA Location: 81946-82555 bp Feature: domain Description: GstA Location: 81 946-82555 bp Feature: gene Location: 82660-83529 bp Feature: domain Description: MhpC Location: 82684-83491 bp Feature: domain Description: MhpC Location: 82684-83491 bp Feature: gene Location: 83708-85075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84011-84629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8401 1 -84629 bp Feature: domain Description: GIIM Note: maturase Location: 84677-84908 bp Feature: domain Description: GIIM Note: maturase Location: 84677-84908 bp Feature: gene Location: 85326-85586 bp Feature: gene Location: 85634-86794 bp Feature: domain Description: PBP2_TRAP_DctP_like_1 Location: 85724-86666 bp Feature: domain Description: PBP2_TRAP_DctP_like_1 Location: 85724-86666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), PRK03573 (transcriptional regulator SlyA; Provisional), RVT-GII, GIIM (pfam08388), PRK05995 (enoyl-CoA hydratase; Provisional), GstA (COG0625), MhpC (COG0596), PBP2_TRAP_DctP_like_1 (cd13666)

Seq: PBEO01000051.1 Alcanivorax sp. isolate sp32 MHASMcontig_3507665, whole genome shotgun sequence (35541 bp)
Overview 1 RT 1: 24428-26846 bp Neighborhood of RT #1 [24428, 26846] RVT-GII Feature: gene Location: 24428-24673 bp Feature: gene Location: 24699-24848 bp Feature: gene Location: 24845-25981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25118-25850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5118-2 5850 bp Feature: gene Location: 25974-26387 bp Feature: gene Location: 26457-26846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PBEO01000059.1 Alcanivorax sp. isolate sp32 MHASMcontig_3530668, whole genome shotgun sequence (96165 bp)
Overview 1 RT 1: 36466-39289 bp 2 RT 2: 63891-68067 bp Neighborhood of RT #1 [36466, 39315] RVT-DGRs Avd_like DUF1566 Neighborhood of RT #2 [63891, 68072] Avd_like RVT-DGRs gp18 Feature: gene Location: 36466-36663 bp Feature: gene Location: 36660-36917 bp Feature: gene Location: 36914-38302 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37388-38075 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 73 88-3 8075 bp Feature: gene Location: 38299-38655 bp Feature: domain Description: Avd_like Location: 38326-38632 bp Feature: domain Description: Avd_like Location: 3 83 26-3 863 2 bp Feature: gene Location: 38698-39315 bp Feature: domain Description: DUF1566 Location: 39055-39289 bp Feature: domain Description: DUF1566 Location: 3 9055-3 9289 bp Feature: gene Location: 63891-64946 bp Feature: gene Location: 64998-65399 bp Feature: domain Description: Avd_like Location: 65025-65322 bp Feature: domain Description: Avd_like Location: 65025-653 22 bp Feature: gene Location: 65680-66807 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 65890-66517 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 65890-66517 bp Feature: gene Location: 66726-67265 bp Feature: gene Location: 67269-68072 bp Feature: domain Description: gp18 Location: 67281-68067 bp Feature: domain Description: gp18 Location: 67281-68067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603), gp18 (COG4672)