myRT

myRT report for GCA_002720135.1_ASM272013v1

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Seq: PBGX01000008.1 Gammaproteobacteria bacterium isolate SP3048 88166, whole genome shotgun sequence (83725 bp)
Overview 1 RT 1: 47436-54483 bp Neighborhood of RT #1 [47436, 54518] Peptidases_S8_Subtilisin_like_2 SpoVK RVT-Retrons RMtype1_S_EcoKI-TRD2-CR2_like RMtype1_S_EcoKI-TRD2-CR2_like Feature: gene Location: 47436-49940 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 48288-49209 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 48288-49209 bp Feature: gene Location: 49964-50965 bp Feature: domain Description: SpoVK Location: 50204-50894 bp Feature: domain Description: SpoVK Location: 50204-50894 bp Feature: gene Location: 51093-52592 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51789-52341 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51 789-52341 bp Feature: gene Location: 52589-53164 bp Feature: gene Location: 53211-54518 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 53631-53775 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD2-CR2_like Location: 53631 -53775 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 53916-54483 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD2-CR2_like Location: 5391 6-54483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidases_S8_Subtilisin_like_2 (cd04847), SpoVK (COG0464), RVT-Retrons, RMtype1_S_EcoKI-TRD2-CR2_like (cd17261)

Seq: PBGX01000055.1 Gammaproteobacteria bacterium isolate SP3048 90276, whole genome shotgun sequence (92544 bp)
Overview 1 RT 1: 24746-30525 bp Neighborhood of RT #1 [24746, 30527] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM ligand_gated_channel Feature: gene Location: 24746-26245 bp Feature: domain Description: LZ_Tnp_IS66 Location: 24971-25190 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2 4971-2 5190 bp Feature: domain Description: zf-IS66 Location: 25211-25337 bp Feature: domain Description: zf-IS66 Location: 2 52 11-2 5337 bp Feature: domain Description: DDE_Tnp_IS66 Location: 25379-26204 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 5379-2 62 04 bp Feature: gene Location: 26453-26635 bp Feature: gene Location: 26703-27941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26907-27564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6907-2 7564 bp Feature: domain Description: GIIM Note: maturase Location: 27642-27864 bp Feature: domain Description: GIIM Note: maturase Location: 2 7642 -2 7864 bp Feature: gene Location: 27967-28140 bp Feature: gene Location: 28278-30527 bp Feature: domain Description: ligand_gated_channel Location: 28410-30525 bp Feature: domain Description: ligand_gated_channel Location: 2 8410-3052 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), ligand_gated_channel (cd01347)