myRT

myRT report for GCA_002721625.1_ASM272162v1

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Seq: PBKZ01000009.1 Rheinheimera sp. isolate SP252 109997, whole genome shotgun sequence (550822 bp)
Overview 1 RT 1: 507173-511884 bp Neighborhood of RT #1 [507173, 511884] AAA_15 AAA_15 TOPRIM_OLD RVT-Retrons COG4994 Feature: gene Location: 507173-508819 bp Feature: domain Description: AAA_15 Location: 507176-507314 bp Feature: domain Description: AAA_1 5 Location: 5071 76-50731 4 bp Feature: domain Description: AAA_15 Location: 507647-508178 bp Feature: domain Description: AAA_1 5 Location: 507647-5081 78 bp Feature: domain Description: TOPRIM_OLD Location: 508331-508574 bp Feature: domain Description: TOPRIM_OLD Location: 508331 -508574 bp Feature: gene Location: 509193-510170 bp Feature: gene Location: 510160-511092 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 510259-510844 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51 0259-51 0844 bp Feature: gene Location: 511275-511646 bp Feature: domain Description: COG4994 Location: 511287-511629 bp Feature: domain Description: COG4994 Location: 51 1 287-51 1 629 bp Feature: gene Location: 511666-511884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RVT-Retrons, COG4994 (Uncharacterized protein )

Seq: PBKZ01000015.1 Rheinheimera sp. isolate SP252 MHASMcontig_1239777, whole genome shotgun sequence (230486 bp)
Overview 1 RT 1: 78963-84629 bp Neighborhood of RT #1 [78963, 84649] DUF1566 DUF1566 RVT-UG12 RMtype1_S_SonII-TRD2-CR2_like HsdS RMtype1_S_SonII-TRD2-CR2_like Feature: gene Location: 78963-79277 bp Feature: gene Location: 79574-80476 bp Feature: domain Description: DUF1566 Location: 79589-79838 bp Feature: domain Description: DUF1566 Location: 79589-79838 bp Feature: domain Description: DUF1566 Location: 79916-80252 bp Feature: domain Description: DUF1566 Location: 79916-802 52 bp Feature: gene Location: 80613-82202 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 81009-81429 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 81009-8142 9 bp Feature: gene Location: 82209-82904 bp Feature: gene Location: 82901-84649 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 83222-83768 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 832 2 2 -83768 bp Feature: domain Description: HsdS Location: 83804-84026 bp Feature: domain Description: HsdS Location: 83804-8402 6 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 84071-84629 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 84071-8462 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-UG12, RMtype1_S_SonII-TRD2-CR2_like (cd17246), HsdS (COG0732)

Seq: PBKZ01000017.1 Rheinheimera sp. isolate SP252 MHASMcontig_1682829, whole genome shotgun sequence (16141 bp)
Overview 1 RT 1: 10898-14530 bp Neighborhood of RT #1 [10898, 14556] HTH_Tnp_1 HTH_Tnp_1 HTH_32 Tra5 RVT-Retrons HTH_17 Feature: gene Location: 10898-11335 bp Feature: domain Description: HTH_Tnp_1 Location: 10904-11012 bp Feature: domain Description: HTH_Tnp_1 Location: 10904-11012 bp Feature: domain Description: HTH_Tnp_1 Location: 11015-11240 bp Feature: domain Description: HTH_Tnp_1 Location: 11015-11240 bp Feature: gene Location: 11338-12396 bp Feature: domain Description: HTH_32 Location: 11440-11662 bp Feature: domain Description: HTH_3 2 Location: 11440-11662 bp Feature: domain Description: Tra5 Location: 11722-12223 bp Feature: domain Description: Tra5 Location: 11722-12223 bp Feature: gene Location: 12405-13355 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12558-13104 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12558-13 104 bp Feature: gene Location: 13565-13960 bp Feature: gene Location: 14347-14556 bp Feature: domain Description: HTH_17 Location: 14377-14530 bp Feature: domain Description: HTH_17 Location: 143 77-1453 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), HTH_32 (pfam13565), Tra5 (COG2801), RVT-Retrons, HTH_17 (pfam12728)