myRT

myRT report for GCA_002726245.1_ASM272624v1

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Seq: PBSM01000010.1 Planctomycetaceae bacterium isolate NP86 MHASMcontig_567628, whole genome shotgun sequence (7836 bp)
Overview 1 RT 1: 3-1668 bp Neighborhood of RT #1 [3, 1668] RVT-GII Feature: gene Location: 3-821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345-819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345-81 9 bp Feature: gene Location: 1128-1313 bp Feature: gene Location: 1399-1668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PBSM01000109.1 Planctomycetaceae bacterium isolate NP86 MHASMcontig_586558, whole genome shotgun sequence (12813 bp)
Overview 1 RT 1: 10073-12812 bp Neighborhood of RT #1 [10073, 12812] MviM RVT-GII Feature: gene Location: 10073-11254 bp Feature: domain Description: MviM Location: 10109-11225 bp Feature: domain Description: MviM Location: 10109-112 2 5 bp Feature: gene Location: 11882-12133 bp Feature: gene Location: 12293-12616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12302-12569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 302 -12 569 bp Feature: gene Location: 12639-12812 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MviM (COG0673), RVT-GII

Seq: PBSM01000110.1 Planctomycetaceae bacterium isolate NP86 MHASMcontig_586817, whole genome shotgun sequence (41186 bp)
Overview 1 RT 1: 767-4399 bp Neighborhood of RT #1 [767, 4399] RVT-GII GIIM DUF1598 Feature: gene Location: 767-1093 bp Feature: gene Location: 1127-1429 bp Feature: gene Location: 1483-2100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1492-1876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1492-1876 bp Feature: domain Description: GIIM Note: maturase Location: 1927-2098 bp Feature: domain Description: GIIM Note: maturase Location: 1927-2098 bp Feature: gene Location: 2352-3719 bp Feature: domain Description: DUF1598 Location: 2892-3141 bp Feature: domain Description: DUF1598 Location: 2892-3 141 bp Feature: gene Location: 3983-4399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF1598 (pfam07643)

Seq: PBSM01000190.1 Planctomycetaceae bacterium isolate NP86 MHASMcontig_606413, whole genome shotgun sequence (14566 bp)
Overview 1 RT 1: 3-2350 bp Neighborhood of RT #1 [3, 2451] RVT-CRISPR-like GIIM Tnp_DNA_bind Feature: gene Location: 3-908 bp Feature: gene Location: 1193-1786 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1199-1613 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1199-1613 bp Feature: domain Description: GIIM Note: maturase Location: 1664-1781 bp Feature: domain Description: GIIM Note: maturase Location: 1664 -1781 bp Feature: gene Location: 1867-1998 bp Feature: gene Location: 2170-2451 bp Feature: domain Description: Tnp_DNA_bind Location: 2188-2350 bp Feature: domain Description: Tnp_DNA_bind Location: 2188-2350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, GIIM (pfam08388), Tnp_DNA_bind (pfam14706)

Seq: PBSM01000195.1 Planctomycetaceae bacterium isolate NP86 MHASMcontig_607615, whole genome shotgun sequence (29269 bp)
Overview 1 RT 1: 17773-21202 bp Neighborhood of RT #1 [17773, 21252] RVT-GII PRK06138 RraA Feature: gene Location: 17773-18129 bp Feature: gene Location: 18130-18639 bp Feature: gene Location: 18695-19252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18701-18881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18701-18881 bp Feature: gene Location: 19700-20497 bp Feature: domain Description: PRK06138 Location: 19712-20483 bp Feature: domain Description: PRK06138 Location: 19712-20483 bp Feature: gene Location: 20581-21252 bp Feature: domain Description: RraA Location: 20617-21202 bp Feature: domain Description: RraA Location: 20617-21202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK06138 (SDR family oxidoreductase), RraA (COG0684)

Seq: PBSM01000304.1 Planctomycetaceae bacterium isolate NP86 MHASMcontig_628407, whole genome shotgun sequence (14961 bp)
Overview 1 RT 1: 9625-14019 bp Neighborhood of RT #1 [9625, 14060] trmE D_ribokin_bact RVT-GII STAS_anti-anti-sigma_factors Feature: gene Location: 9625-10980 bp Feature: domain Description: trmE Location: 9640-10978 bp Feature: domain Description: trmE Location: 96 40-10978 bp Feature: gene Location: 10995-11930 bp Feature: domain Description: D_ribokin_bact Location: 11022-11901 bp Feature: domain Description: D_ribokin_bact Location: 11022-11901 bp Feature: gene Location: 12149-12634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12269-12527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1226 9-12527 bp Feature: gene Location: 13390-13734 bp Feature: gene Location: 13773-14060 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 13818-14019 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 13818-14019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trmE (PRK05291), D_ribokin_bact (TIGR02152), RVT-GII, STAS_anti-anti-sigma_factors (cd07043)