myRT

myRT report for GCA_002729725.1_ASM272972v1

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Seq: PBYS01000004.1 Puniceicoccaceae bacterium isolate NP23 23164, whole genome shotgun sequence (56650 bp)
Overview 1 RT 1: 1-3538 bp Neighborhood of RT #1 [1, 3538] RVT-UG12 Feature: gene Location: 1-693 bp Feature: gene Location: 846-2417 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1191-1647 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 1 91 -1 647 bp Feature: gene Location: 2510-2677 bp Feature: gene Location: 2714-3538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12

Seq: PBYS01000012.1 Puniceicoccaceae bacterium isolate NP23 MHASMcontig_491114, whole genome shotgun sequence (7269 bp)
Overview 1 RT 1: 1806-5136 bp Neighborhood of RT #1 [1806, 5136] RVT-GII RVT-GII GIIM Feature: gene Location: 1806-2345 bp Feature: gene Location: 2649-2963 bp Feature: gene Location: 2960-3586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3206-3581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 06-3581 bp Feature: gene Location: 3656-4318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3662-3869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3662 -3869 bp Feature: domain Description: GIIM Note: maturase Location: 3911-4127 bp Feature: domain Description: GIIM Note: maturase Location: 3911-412 7 bp Feature: gene Location: 4412-4798 bp Feature: gene Location: 4867-5136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PBYS01000031.1 Puniceicoccaceae bacterium isolate NP23 MHASMcontig_503040, whole genome shotgun sequence (71331 bp)
Overview 1 RT 1: 68197-70444 bp Neighborhood of RT #1 [68197, 70956] RVT-GII StbD RAYT Feature: gene Location: 68197-68439 bp Feature: gene Location: 68582-68752 bp Feature: gene Location: 68778-69353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68790-68874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68790-68874 bp Feature: gene Location: 69556-69807 bp Feature: domain Description: StbD Location: 69568-69790 bp Feature: domain Description: StbD Location: 69568-69790 bp Feature: gene Location: 70042-70956 bp Feature: domain Description: RAYT Location: 70045-70444 bp Feature: domain Description: RAYT Location: 70045-70444 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, StbD (COG2161), RAYT (COG1943)

Seq: PBYS01000033.1 Puniceicoccaceae bacterium isolate NP23 MHASMcontig_503867, whole genome shotgun sequence (21187 bp)
Overview 1 RT 1: 6186-15008 bp Neighborhood of RT #1 [6186, 15070] DDE_Tnp_1_4 RVT-UG5 nitrilase YeeA YeeA YeeA COG2865 Feature: gene Location: 6186-7820 bp Feature: domain Description: DDE_Tnp_1_4 Location: 6342-7641 bp Feature: domain Description: DDE_Tnp_1_4 Location: 634 2-764 1 bp Feature: gene Location: 7837-8205 bp Feature: gene Location: 8208-11267 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8700-9171 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8700-9171 bp Feature: domain Description: nitrilase Location: 10749-11175 bp Feature: domain Description: nitrilase Location: 1074 9-11175 bp Feature: gene Location: 11264-13543 bp Feature: domain Description: YeeA Location: 11846-12062 bp Feature: domain Description: YeeA Location: 1184 6-12062 bp Feature: domain Description: YeeA Location: 12476-12719 bp Feature: domain Description: YeeA Location: 124 76-12719 bp Feature: domain Description: YeeA Location: 13094-13514 bp Feature: domain Description: YeeA Location: 13094 -13514 bp Feature: gene Location: 13592-15070 bp Feature: domain Description: COG2865 Location: 13625-15008 bp Feature: domain Description: COG2865 Location: 13625-15008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_4 (pfam13701), RVT-UG5, nitrilase (cl11424), YeeA (COG1002), COG2865 (Predicted transcriptional regulator, contains HTH domain )

Seq: PBYS01000069.1 Puniceicoccaceae bacterium isolate NP23 MHASMcontig_528856, whole genome shotgun sequence (8085 bp)
Overview 1 RT 1: 2-6660 bp Neighborhood of RT #1 [2, 6660] RVT-CRISPR-like Feature: gene Location: 2-4333 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1976-2546 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1976-25 46 bp Feature: gene Location: 4442-4582 bp Feature: gene Location: 4621-6660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: PBYS01000095.1 Puniceicoccaceae bacterium isolate NP23 MHASMcontig_547774, whole genome shotgun sequence (8647 bp)
Overview 1 RT 1: 5234-8585 bp Neighborhood of RT #1 [5234, 8585] RVT-GII GIIM PRK14473 Feature: gene Location: 5234-5398 bp Feature: gene Location: 5651-6016 bp Feature: gene Location: 6013-7458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6400-7069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 400-706 9 bp Feature: domain Description: GIIM Note: maturase Location: 7147-7351 bp Feature: domain Description: GIIM Note: maturase Location: 7147-7351 bp Feature: gene Location: 7570-7761 bp Feature: domain Description: PRK14473 Location: 7588-7741 bp Feature: domain Description: PRK14473 Location: 7588-7741 bp Feature: gene Location: 8121-8585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK14473 (F0F1 ATP synthase subunit B; Provisional)