myRT

myRT report for GCA_002730155.1_ASM273015v1

Download annotations/find similar RTs

Seq: PBZI01000023.1 Alteromonas sp. isolate NP15 19161, whole genome shotgun sequence (101257 bp)
Overview 1 RT 1: 79979-90041 bp Neighborhood of RT #1 [79979, 90067] SIR2_2 YjgR YjgR RVT-UG5 COG0610 DUF45 Feature: gene Location: 79979-81064 bp Feature: domain Description: SIR2_2 Location: 80393-80888 bp Feature: domain Description: SIR2_2 Location: 80393-80888 bp Feature: gene Location: 81066-82808 bp Feature: domain Description: YjgR Location: 81516-81711 bp Feature: domain Description: YjgR Location: 81 51 6-81 71 1 bp Feature: domain Description: YjgR Location: 82161-82740 bp Feature: domain Description: YjgR Location: 821 61 -82740 bp Feature: gene Location: 83036-85978 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 83525-83981 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 83525-83981 bp Feature: gene Location: 86022-89303 bp Feature: domain Description: COG0610 Location: 86049-89142 bp Feature: domain Description: COG061 0 Location: 86049-891 42 bp Feature: gene Location: 89318-90067 bp Feature: domain Description: DUF45 Location: 89426-90041 bp Feature: domain Description: DUF45 Location: 89426-90041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), YjgR (COG0433), RVT-UG5, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), DUF45 (pfam01863)

Seq: PBZI01000006.1 Alteromonas sp. isolate NP15 4889, whole genome shotgun sequence (106545 bp)
Overview 1 RT 1: 72-4439 bp Neighborhood of RT #1 [72, 4543] RVT-UG8 RVT-UG3 M48C_Oma1_like SlyB Feature: gene Location: 72-1559 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 576-1020 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 576-102 0 bp Feature: gene Location: 1549-2760 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1840-2305 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1840-2 305 bp Feature: gene Location: 3050-3847 bp Feature: domain Description: M48C_Oma1_like Location: 3257-3803 bp Feature: domain Description: M48C_Oma1_like Location: 32 57-3803 bp Feature: gene Location: 4055-4543 bp Feature: domain Description: SlyB Location: 4118-4439 bp Feature: domain Description: SlyB Location: 4118-4439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, M48C_Oma1_like (cd07342), SlyB (COG3133)