myRT

myRT report for GCA_002731875.1_ASM273187v1

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Seq: PCCY01000011.1 Roseobacter sp. isolate NP10 78450, whole genome shotgun sequence (118983 bp)
Overview 1 RT 1: 32884-38042 bp Neighborhood of RT #1 [32884, 38042] DUF4420 AIPR RVT-UG2 Feature: gene Location: 32884-33882 bp Feature: domain Description: DUF4420 Location: 32905-33817 bp Feature: domain Description: DUF4420 Location: 32905-3381 7 bp Feature: gene Location: 33885-35960 bp Feature: domain Description: AIPR Location: 34602-35562 bp Feature: domain Description: AIPR Location: 34602-35562 bp Feature: gene Location: 36031-37323 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 36217-37000 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3621 7-37000 bp Feature: gene Location: 37511-37822 bp Feature: gene Location: 37911-38042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4420 (pfam14390), AIPR (pfam10592), RVT-UG2

Seq: PCCY01000012.1 Roseobacter sp. isolate NP10 79054, whole genome shotgun sequence (137517 bp)
Overview 1 RT 1: 121533-127474 bp Neighborhood of RT #1 [121533, 127539] HTH_ARSR RHOD_PspE2 RVT-UG2 AIPR DUF4420 Feature: gene Location: 121533-122213 bp Feature: domain Description: HTH_ARSR Location: 121590-121809 bp Feature: domain Description: HTH_ARSR Location: 12 1590-12 1809 bp Feature: domain Description: RHOD_PspE2 Location: 121899-122175 bp Feature: domain Description: RHOD_PspE2 Location: 12 1899-12 2 175 bp Feature: gene Location: 122300-122533 bp Feature: gene Location: 123160-124452 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 123346-124129 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 12 3346-12 412 9 bp Feature: gene Location: 124523-126598 bp Feature: domain Description: AIPR Location: 125240-126200 bp Feature: domain Description: AIPR Location: 12 52 40-12 62 00 bp Feature: gene Location: 126601-127539 bp Feature: domain Description: DUF4420 Location: 126619-127474 bp Feature: domain Description: DUF442 0 Location: 12 6619-12 7474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), RHOD_PspE2 (cd01521), RVT-UG2, AIPR (pfam10592), DUF4420 (pfam14390)

Seq: PCCY01000023.1 Roseobacter sp. isolate NP10 93962, whole genome shotgun sequence (150453 bp)
Overview 1 RT 1: 86183-90198 bp Neighborhood of RT #1 [86183, 90198] HTH_XRE LexA_DNA_bind RVT-UG16 Feature: gene Location: 86183-87502 bp Feature: domain Description: HTH_XRE Location: 86594-86708 bp Feature: domain Description: HTH_XRE Location: 86594-86708 bp Feature: gene Location: 87623-88075 bp Feature: domain Description: LexA_DNA_bind Location: 87830-88004 bp Feature: domain Description: LexA_DNA_bind Location: 8783 0-88004 bp Feature: gene Location: 88895-89791 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 88898-89081 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 88898-89081 bp Feature: gene Location: 89800-89940 bp Feature: gene Location: 90013-90198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), LexA_DNA_bind (pfam01726), RVT-UG16