myRT

myRT report for GCA_002732485.1_ASM273248v1

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Seq: NQJX01000037.1 Erwinia amylovora strain MANB02-1 NODE_14_length_41182_cov_69.9825, whole genome shotgun sequence (41182 bp)
Overview 1 RT 1: 35744-40407 bp Neighborhood of RT #1 [35744, 40418] RVT-Retrons TIGR04141 Feature: gene Location: 35744-35926 bp Feature: gene Location: 35956-36420 bp Feature: gene Location: 36849-38030 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36999-37572 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36999-37572 bp Feature: gene Location: 38311-38682 bp Feature: gene Location: 38811-40418 bp Feature: domain Description: TIGR04141 Location: 38835-40407 bp Feature: domain Description: TIGR041 41 Location: 38835-40407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIGR04141 (sporadically distributed protein, TIGR04141 family)

Seq: NQJX01000029.1 Erwinia amylovora strain MANB02-1 NODE_1_length_859783_cov_59.5015, whole genome shotgun sequence (859783 bp)
Overview 1 RT 1: 853312-857714 bp Neighborhood of RT #1 [853312, 857714] TraD PRK13889 RVT-Retrons HTH_XRE Feature: gene Location: 853312-853623 bp Feature: domain Description: TraD Location: 853426-853600 bp Feature: domain Description: TraD Location: 85342 6-853600 bp Feature: gene Location: 854455-855957 bp Feature: domain Description: PRK13889 Location: 854458-855037 bp Feature: domain Description: PRK13889 Location: 854458-855037 bp Feature: gene Location: 856034-856810 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 856037-856403 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 856037-856403 bp Feature: gene Location: 857127-857408 bp Feature: domain Description: HTH_XRE Location: 857142-857307 bp Feature: domain Description: HTH_XRE Location: 857142 -857307 bp Feature: gene Location: 857499-857714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons, HTH_XRE (smart00530)