myRT

myRT report for GCA_002733025.1_ASM273302v1

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Seq: NVTZ01000052.1 Halomonas sp. isolate NORP102 Contig_sourceCTD_10516, whole genome shotgun sequence (3357 bp)
Overview 1 RT 1: 1-3356 bp Neighborhood of RT #1 [1, 3356] L1-EN RVT-GII Feature: gene Location: 1-771 bp Feature: domain Description: L1-EN Location: 244-679 bp Feature: domain Description: L1 -EN Location: 244-679 bp Feature: gene Location: 906-3113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1842-2505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 842-2505 bp Feature: gene Location: 3174-3356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NVTZ01000038.1 Halomonas sp. isolate NORP102 Contig_sourceCTD_2025, whole genome shotgun sequence (12969 bp)
Overview 1 RT 1: 8998-12957 bp Neighborhood of RT #1 [8998, 12968] AAA-ATPase_like PDDEXK_9 RVT-GII DDE_Tnp_1_4 Feature: gene Location: 8998-9417 bp Feature: gene Location: 9757-11319 bp Feature: domain Description: AAA-ATPase_like Location: 9787-10588 bp Feature: domain Description: AAA-ATPase_like Location: 9787-10588 bp Feature: domain Description: PDDEXK_9 Location: 11020-11296 bp Feature: domain Description: PDDEXK_9 Location: 1102 0-112 96 bp Feature: gene Location: 11449-12747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11731-12400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11731-12 400 bp Feature: gene Location: 12768-12968 bp Feature: domain Description: DDE_Tnp_1_4 Location: 12777-12957 bp Feature: domain Description: DDE_Tnp_1_4 Location: 12 777-12 957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_1_4 (pfam13701), AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011)

Seq: NVTZ01000022.1 Halomonas sp. isolate NORP102 Contig_sourceCTD_371, whole genome shotgun sequence (40999 bp)
Overview 1 RT 1: 7-7255 bp Neighborhood of RT #1 [7, 7257] AraC_N AraC CAD1 RVT-GII GIIM DDE_Tnp_1 PRK15048 Feature: gene Location: 7-900 bp Feature: domain Description: AraC_N Location: 94-538 bp Feature: domain Description: AraC_N Location: 94-53 8 bp Feature: domain Description: AraC Location: 580-883 bp Feature: domain Description: AraC Location: 580-883 bp Feature: gene Location: 1098-2159 bp Feature: domain Description: CAD1 Location: 1116-2130 bp Feature: domain Description: CAD1 Location: 1116-213 0 bp Feature: gene Location: 2683-4071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3007-3625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 007-3 625 bp Feature: domain Description: GIIM Note: maturase Location: 3676-3892 bp Feature: domain Description: GIIM Note: maturase Location: 3 676-3 892 bp Feature: gene Location: 5005-6201 bp Feature: domain Description: DDE_Tnp_1 Location: 5329-5980 bp Feature: domain Description: DDE_Tnp_1 Location: 53 29-5980 bp Feature: gene Location: 6361-7257 bp Feature: domain Description: PRK15048 Location: 6364-7255 bp Feature: domain Description: PRK15048 Location: 63 64-7255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CAD1 (cd05283), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), PRK15048 (methyl-accepting chemotaxis protein II; Provisional)