myRT

myRT report for GCA_002733765.1_ASM273376v1

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Seq: NVWU01000013.1 Colwellia sp. isolate NORP29 Contig_source1383C_231, whole genome shotgun sequence (167057 bp)
Overview 1 RT 1: 614-4511 bp Neighborhood of RT #1 [614, 4519] RVT-GII GIIM smpB PRK10724 Feature: gene Location: 614-835 bp Feature: gene Location: 1101-2366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1314-1932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 4-1 932 bp Feature: domain Description: GIIM Note: maturase Location: 1980-2199 bp Feature: domain Description: GIIM Note: maturase Location: 1 980-21 99 bp Feature: gene Location: 3378-3917 bp Feature: domain Description: smpB Location: 3459-3900 bp Feature: domain Description: smpB Location: 3459-3900 bp Feature: gene Location: 4079-4519 bp Feature: domain Description: PRK10724 Location: 4082-4511 bp Feature: domain Description: PRK1 0724 Location: 4082-451 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), smpB (TIGR00086), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: NVWU01000035.1 Colwellia sp. isolate NORP29 Contig_source1383C_3557, whole genome shotgun sequence (27217 bp)
Overview 1 RT 1: 5333-10183 bp Neighborhood of RT #1 [5333, 10183] HAD-SF-IB-hyp1 RVT-GII RVT-GII GIIM KAP_NTPase Feature: gene Location: 5333-6028 bp Feature: domain Description: HAD-SF-IB-hyp1 Location: 5351-5933 bp Feature: domain Description: HAD-SF-IB-hyp1 Location: 5351-5933 bp Feature: gene Location: 6324-6464 bp Feature: gene Location: 6722-7081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6998-7061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6998-7061 bp Feature: gene Location: 7198-7905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7201-7612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 01-7612 bp Feature: domain Description: GIIM Note: maturase Location: 7657-7861 bp Feature: domain Description: GIIM Note: maturase Location: 7657-7861 bp Feature: gene Location: 8132-9526 bp Feature: domain Description: KAP_NTPase Location: 8213-9014 bp Feature: domain Description: KAP_NTPase Location: 82 13-9014 bp Feature: gene Location: 9671-10183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HAD-SF-IB-hyp1 (TIGR01490), RVT-GII, GIIM (pfam08388), KAP_NTPase (pfam07693)