myRT

myRT report for GCA_002734005.1_ASM273400v1

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Seq: NVXS01000021.1 Colwellia sp. isolate NORP5 Contig_source1382A_1340, whole genome shotgun sequence (60494 bp)
Overview 1 RT 1: 24282-30152 bp Neighborhood of RT #1 [24282, 30152] Arm-DNA-bind_3 INT_P4_C RVT-Retrons ABC_ATPase ABC_ATPase Feature: gene Location: 24282-24866 bp Feature: gene Location: 25585-26841 bp Feature: domain Description: Arm-DNA-bind_3 Location: 25609-25885 bp Feature: domain Description: Arm-DNA-bind_3 Location: 25609-25885 bp Feature: domain Description: INT_P4_C Location: 26257-26827 bp Feature: domain Description: INT_P4_C Location: 26257-26827 bp Feature: gene Location: 27351-28289 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27402-27978 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27402-27978 bp Feature: gene Location: 28291-29673 bp Feature: domain Description: ABC_ATPase Location: 28333-28435 bp Feature: domain Description: ABC_ATPase Location: 28333-28435 bp Feature: domain Description: ABC_ATPase Location: 28858-29083 bp Feature: domain Description: ABC_ATPase Location: 28858-29083 bp Feature: gene Location: 29916-30152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-Retrons, ABC_ATPase (pfam09818)

Seq: NVXS01000004.1 Colwellia sp. isolate NORP5 Contig_source1382A_260, whole genome shotgun sequence (144737 bp)
Overview 1 RT 1: 36503-43044 bp Neighborhood of RT #1 [36503, 43055] PRK12513 RVT-UG15 NhaC PRK03642 Feature: gene Location: 36503-37093 bp Feature: domain Description: PRK12513 Location: 36551-37085 bp Feature: domain Description: PRK12 513 Location: 36551-37085 bp Feature: gene Location: 37080-37691 bp Feature: gene Location: 37841-39487 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 38261-38666 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 382 61-38666 bp Feature: gene Location: 39849-41225 bp Feature: domain Description: NhaC Location: 39861-41214 bp Feature: domain Description: NhaC Location: 39861-412 14 bp Feature: gene Location: 41403-43055 bp Feature: domain Description: PRK03642 Location: 41880-43044 bp Feature: domain Description: PRK03642 Location: 41880-43044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12513 (RNA polymerase sigma factor; Provisional), RVT-UG15, NhaC (COG1757), PRK03642 (putative periplasmic esterase; Provisional)

Seq: NVXS01000144.1 Colwellia sp. isolate NORP5 Contig_source1383C_23143, whole genome shotgun sequence (31961 bp)
Overview 1 RT 1: 18340-24210 bp Neighborhood of RT #1 [18340, 24210] Arm-DNA-bind_3 INT_P4_C RVT-Retrons ABC_ATPase ABC_ATPase Feature: gene Location: 18340-18924 bp Feature: gene Location: 19643-20899 bp Feature: domain Description: Arm-DNA-bind_3 Location: 19667-19943 bp Feature: domain Description: Arm-DNA-bind_3 Location: 19667-19943 bp Feature: domain Description: INT_P4_C Location: 20315-20885 bp Feature: domain Description: INT_P4_C Location: 203 15-20885 bp Feature: gene Location: 21409-22347 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21460-22036 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21460-2203 6 bp Feature: gene Location: 22349-23731 bp Feature: domain Description: ABC_ATPase Location: 22391-22493 bp Feature: domain Description: ABC_ATPase Location: 223 91-22493 bp Feature: domain Description: ABC_ATPase Location: 22916-23141 bp Feature: domain Description: ABC_ATPase Location: 22916-23 141 bp Feature: gene Location: 23974-24210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-Retrons, ABC_ATPase (pfam09818)

Seq: NVXS01000092.1 Colwellia sp. isolate NORP5 Contig_source1383C_861, whole genome shotgun sequence (78935 bp)
Overview 1 RT 1: 1784-8328 bp Neighborhood of RT #1 [1784, 8336] PRK03642 NhaC RVT-UG15 PRK12513 Feature: gene Location: 1784-3436 bp Feature: domain Description: PRK03642 Location: 2261-3425 bp Feature: domain Description: PRK0364 2 Location: 2261-34 25 bp Feature: gene Location: 3614-4990 bp Feature: domain Description: NhaC Location: 3626-4979 bp Feature: domain Description: NhaC Location: 3626-4 979 bp Feature: gene Location: 5352-6998 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 5772-6177 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 5772-6177 bp Feature: gene Location: 7148-7759 bp Feature: gene Location: 7746-8336 bp Feature: domain Description: PRK12513 Location: 7794-8328 bp Feature: domain Description: PRK12513 Location: 7794 -8328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03642 (putative periplasmic esterase; Provisional), NhaC (COG1757), RVT-UG15, PRK12513 (RNA polymerase sigma factor; Provisional)