myRT

myRT report for GCA_002734905.1_ASM273490v1

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Seq: BEJP01000171.1 Escherichia coli O26:H11 TC3486 DNA, scaffold171, whole genome shotgun sequence (107560 bp)
Overview 1 RT 1: 104390-106946 bp Neighborhood of RT #1 [104390, 106972] DUF932 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 104390-104635 bp Feature: gene Location: 104635-105021 bp Feature: domain Description: DUF932 Location: 104641-104986 bp Feature: domain Description: DUF932 Location: 1 04641 -1 04986 bp Feature: gene Location: 105194-106972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105455-106250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 05455-1 06250 bp Feature: domain Description: Intron_maturas2 Location: 106376-106601 bp Feature: domain Description: Intron_maturas2 Location: 1 06376-1 06601 bp Feature: domain Description: HNHc Note: nucleases Location: 106796-106946 bp Feature: domain Description: HNHc Note: nucleases Location: 1 06796-1 06946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: BEJP01000325.1 Escherichia coli O26:H11 TC3486 DNA, scaffold325, whole genome shotgun sequence (2269 bp)
Overview 1 RT 1: 1-2207 bp Neighborhood of RT #1 [1, 2263] RVT_N RVT-GII YkfC HNHc Feature: gene Location: 1-276 bp Feature: gene Location: 377-517 bp Feature: gene Location: 539-2263 bp Feature: RT Description: RVT_N Location: 596-833 bp Feature: RT Description: RVT_N Location: 596-833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 884-1532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 884-1532 bp Feature: domain Description: YkfC Location: 1664-1820 bp Feature: domain Description: YkfC Location: 1664-182 0 bp Feature: domain Description: HNHc Note: nucleases Location: 2048-2207 bp Feature: domain Description: HNHc Note: nucleases Location: 2 048-2 2 07 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)