myRT

myRT report for GCA_002735535.1_ASM273553v1

Download annotations/find similar RTs

Seq: PDYD01000203.1 Shigella boydii strain FC1655 NODE_203_length_7124_cov_66.6975_ID_405, whole genome shotgun sequence (7124 bp)
Overview 1 RT 1: 4-3022 bp Neighborhood of RT #1 [4, 3036] InsE DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 4-330 bp Feature: domain Description: InsE Location: 7-328 bp Feature: domain Description: InsE Location: 7-328 bp Feature: gene Location: 436-567 bp Feature: domain Description: DDE_Tnp_IS66 Location: 448-541 bp Feature: domain Description: DDE_Tnp_IS66 Location: 448-541 bp Feature: gene Location: 1129-2262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1231-1885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 231 -1 885 bp Feature: domain Description: GIIM Note: maturase Location: 1963-2185 bp Feature: domain Description: GIIM Note: maturase Location: 1 963-21 85 bp Feature: gene Location: 2378-2524 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2390-2501 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2390-2501 bp Feature: gene Location: 2551-3036 bp Feature: domain Description: COG3547 Location: 2569-3022 bp Feature: domain Description: COG3547 Location: 2569-3022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase ), InsE (COG2963), DDE_Tnp_IS66 (pfam03050)

Seq: PDYD01000442.1 Shigella boydii strain FC1655 NODE_443_length_920_cov_48.7783_ID_885, whole genome shotgun sequence (920 bp)
Overview 1 RT 1: 97-790 bp Neighborhood of RT #1 [97, 792] RVT-GII Feature: gene Location: 97-792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 397-790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 397-790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII