myRT

myRT report for GCA_002735695.1_ASM273569v1

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Seq: PDZH01000114.1 Chitinimonas sp. BJB300 NODE_114_length_12610_cov_40.821517, whole genome shotgun sequence (12610 bp)
Overview 1 RT 1: 7385-10258 bp Neighborhood of RT #1 [7385, 10350] PHA02517 RVT-GII RVT-GII GIIM PHA02517 DDE_3 Feature: gene Location: 7385-7585 bp Feature: domain Description: PHA02517 Location: 7391-7565 bp Feature: domain Description: PHA0251 7 Location: 7391 -7565 bp Feature: gene Location: 7589-7717 bp Feature: gene Location: 8079-8471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8277-8463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8277-8463 bp Feature: gene Location: 8475-9320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8481-8934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8481 -8934 bp Feature: domain Description: GIIM Note: maturase Location: 9012-9240 bp Feature: domain Description: GIIM Note: maturase Location: 901 2-9240 bp Feature: gene Location: 9331-9891 bp Feature: domain Description: PHA02517 Location: 9403-9874 bp Feature: domain Description: PHA0251 7 Location: 9403-9874 bp Feature: gene Location: 10027-10350 bp Feature: domain Description: DDE_3 Location: 10033-10258 bp Feature: domain Description: DDE_3 Location: 1 0033-1 0258 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358)

Seq: PDZH01000191.1 Chitinimonas sp. BJB300 NODE_191_length_5086_cov_51.593265, whole genome shotgun sequence (5086 bp)
Overview 1 RT 1: 939-4248 bp Neighborhood of RT #1 [939, 4248] RVT-GII GIIM Feature: gene Location: 939-1580 bp Feature: gene Location: 1583-1795 bp Feature: gene Location: 2063-3457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2417-3080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 417-3080 bp Feature: domain Description: GIIM Note: maturase Location: 3149-3365 bp Feature: domain Description: GIIM Note: maturase Location: 3149-3365 bp Feature: gene Location: 3613-3849 bp Feature: gene Location: 3955-4248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PDZH01000281.1 Chitinimonas sp. BJB300 NODE_282_length_1920_cov_146.090909, whole genome shotgun sequence (1920 bp)
Overview 1 RT 1: 257-1458 bp Neighborhood of RT #1 [257, 1850] RVT-GII Feature: gene Location: 257-496 bp Feature: gene Location: 504-1850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 771-1458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 771-1458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII