myRT

myRT report for GCA_002736085.1_ASM273608v1

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Seq: CP024092.1 Escherichia coli strain UFU_EC98 chromosome (4849850 bp)
Overview 1 RT 1: 1256230-1265690 bp 2 RT 2: 1318309-1321788 bp 3 RT 3: 2453089-2457088 bp Neighborhood of RT #1 [1256230, 1265917] RVT-UG7 PRK09692 DUF4062 HTH_XRE RVT-Retrons Resolvase Neighborhood of RT #2 [1318309, 1321853] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [2453089, 2457096] DcuC RVT-GII Asparaginase_2 Feature: gene Location: 1256230-1256370 bp Feature: gene Location: 1256480-1257220 bp Feature: gene Location: 1257217-1258845 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1257625-1258054 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 257625-1 258054 bp Feature: gene Location: 1258838-1260022 bp Feature: domain Description: PRK09692 Location: 1258844-1259999 bp Feature: domain Description: PRK09692 Location: 1 258844-1 259999 bp Feature: gene Location: 1260731-1261912 bp Feature: domain Description: DUF4062 Location: 1260746-1261073 bp Feature: domain Description: DUF4062 Location: 1 260746-1 261 073 bp Feature: gene Location: 1261943-1262404 bp Feature: domain Description: HTH_XRE Location: 1261973-1262141 bp Feature: domain Description: HTH_XRE Location: 1 261 973-1 2621 41 bp Feature: gene Location: 1262644-1263141 bp Feature: gene Location: 1263278-1264984 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1263428-1264025 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 263428-1 264025 bp Feature: gene Location: 1265021-1265203 bp Feature: gene Location: 1265252-1265917 bp Feature: domain Description: Resolvase Location: 1265273-1265690 bp Feature: domain Description: Resolvase Location: 1 265273-1 265690 bp Feature: gene Location: 1318309-1318515 bp Feature: gene Location: 1318690-1319094 bp Feature: domain Description: PHA02517 Location: 1318693-1319083 bp Feature: domain Description: PHA0251 7 Location: 1 31 8693-1 31 9083 bp Feature: gene Location: 1319259-1320782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1319532-1320264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 9532-1 320264 bp Feature: domain Description: GIIM Note: maturase Location: 1320339-1320537 bp Feature: domain Description: GIIM Note: maturase Location: 1 320339-1 320537 bp Feature: gene Location: 1320736-1321161 bp Feature: gene Location: 1321374-1321853 bp Feature: domain Description: PHA02517 Location: 1321434-1321788 bp Feature: domain Description: PHA0251 7 Location: 1 321 434-1 321 788 bp Feature: gene Location: 2453089-2454450 bp Feature: domain Description: DcuC Location: 2453092-2454424 bp Feature: domain Description: DcuC Location: 2453092-2454424 bp Feature: gene Location: 2454503-2454874 bp Feature: gene Location: 2455096-2455542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2455402-2455504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2455402-2455504 bp Feature: gene Location: 2455590-2455739 bp Feature: gene Location: 2456065-2457096 bp Feature: domain Description: Asparaginase_2 Location: 2456155-2457088 bp Feature: domain Description: Asparaginase_2 Location: 24561 55-2457088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), DUF4062 (pfam13271), HTH_XRE (smart00530), RVT-Retrons, Resolvase (smart00857), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DcuC (TIGR00771)
Asparaginase_2 (pfam01112)