myRT

myRT report for GCA_002736745.1_ASM273674v1

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Seq: PEDR01000040.1 Escherichia coli strain ICBECG4 NL21_S21_L001_R1_001__paired__contig_40, whole genome shotgun sequence (91784 bp)
Overview 1 RT 1: 47080-50962 bp Neighborhood of RT #1 [47080, 50967] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 47080-47538 bp Feature: domain Description: dut Location: 47086-47533 bp Feature: domain Description: dut Location: 47086-47533 bp Feature: gene Location: 47645-48241 bp Feature: domain Description: slmA Location: 47651-48227 bp Feature: domain Description: slmA Location: 47651 -48227 bp Feature: gene Location: 48287-49246 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48422-48971 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48422-48971 bp Feature: gene Location: 49544-50200 bp Feature: domain Description: pyrE Location: 49562-50195 bp Feature: domain Description: pyrE Location: 49562-501 95 bp Feature: gene Location: 50251-50967 bp Feature: domain Description: rph Location: 50254-50962 bp Feature: domain Description: rph Location: 50254-50962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: PEDR01000041.1 Escherichia coli strain ICBECG4 NL21_S21_L001_R1_001__paired__contig_41, whole genome shotgun sequence (18158 bp)
Overview 1 RT 1: 2266-6266 bp Neighborhood of RT #1 [2266, 6274] DcuC RVT-GII Asparaginase_2 Feature: gene Location: 2266-3627 bp Feature: domain Description: DcuC Location: 2269-3601 bp Feature: domain Description: DcuC Location: 2 2 69-3601 bp Feature: gene Location: 3680-4051 bp Feature: gene Location: 4273-4719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4579-4681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4579-4681 bp Feature: gene Location: 4767-4916 bp Feature: gene Location: 5243-6274 bp Feature: domain Description: Asparaginase_2 Location: 5333-6266 bp Feature: domain Description: Asparaginase_2 Location: 5333-62 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112)