myRT

myRT report for GCA_002739365.1_ASM273936v1

Download annotations/find similar RTs

Seq: MQYX01000022.1 Stenotrophomonas maltophilia strain GC_2009 contig22, whole genome shotgun sequence (139344 bp)
Overview 1 RT 1: 36175-40310 bp Neighborhood of RT #1 [36175, 40324] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 36175-36852 bp Feature: gene Location: 36845-38068 bp Feature: gene Location: 38065-39432 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 38425-39121 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 38425-391 21 bp Feature: gene Location: 39429-39872 bp Feature: domain Description: Avd_like Location: 39459-39771 bp Feature: domain Description: Avd_like Location: 39459-39771 bp Feature: gene Location: 39899-40324 bp Feature: domain Description: DUF1566 Location: 40052-40310 bp Feature: domain Description: DUF1 566 Location: 40052-4031 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: MQYX01000087.1 Stenotrophomonas maltophilia strain GC_2009 contig87, whole genome shotgun sequence (40496 bp)
Overview 1 RT 1: 5681-12667 bp Neighborhood of RT #1 [5681, 12669] DUF805 RVT_N RVT-GII GIIM HNHc Triacylglycerol_lipase_like YhjY PRK05659 Feature: gene Location: 5681-6835 bp Feature: gene Location: 6910-7314 bp Feature: domain Description: DUF805 Location: 6943-7297 bp Feature: domain Description: DUF805 Location: 6943-72 97 bp Feature: gene Location: 7741-9393 bp Feature: RT Description: RVT_N Location: 7792-8035 bp Feature: RT Description: RVT_N Location: 7792 -8035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8080-8701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8080-8701 bp Feature: domain Description: GIIM Note: maturase Location: 8755-8986 bp Feature: domain Description: GIIM Note: maturase Location: 8755-8986 bp Feature: domain Description: HNHc Note: nucleases Location: 9187-9340 bp Feature: domain Description: HNHc Note: nucleases Location: 9187-9340 bp Feature: gene Location: 10427-12262 bp Feature: domain Description: Triacylglycerol_lipase_like Location: 10517-11342 bp Feature: domain Description: Triacylglycerol_lipase_like Location: 10517-11342 bp Feature: domain Description: YhjY Location: 11534-12248 bp Feature: domain Description: YhjY Location: 11534-12 2 48 bp Feature: gene Location: 12469-12669 bp Feature: domain Description: PRK05659 Location: 12472-12667 bp Feature: domain Description: PRK05659 Location: 12 472 -12 667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Triacylglycerol_lipase_like (cd01847), YhjY (COG5571), PRK05659 (sulfur carrier protein ThiS; Validated), DUF805 (pfam05656), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)