myRT

myRT report for GCA_002740625.1_ASM274062v1

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Seq: PCFR01000045.1 Klebsiella pneumoniae strain XPY166 NODE_46_length_1774_cov_541.106567, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1794 bp Neighborhood of RT #1 [59, 1794] RVT-GII Feature: gene Location: 59-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 -1 1 51 bp Feature: gene Location: 1543-1794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PCFR01000048.1 Klebsiella pneumoniae strain XPY166 NODE_51_length_13785_cov_47.367863, whole genome shotgun sequence (13903 bp)
Overview 1 RT 1: 7302-11069 bp Neighborhood of RT #1 [7302, 11069] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7302-7724 bp Feature: domain Description: DUF1380 Location: 7305-7599 bp Feature: domain Description: DUF1380 Location: 7305-7599 bp Feature: gene Location: 7721-7912 bp Feature: gene Location: 8226-9893 bp Feature: RT Description: RVT_N Location: 8274-8511 bp Feature: RT Description: RVT_N Location: 82 74-8511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8562-9204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8562 -92 04 bp Feature: domain Description: GIIM Note: maturase Location: 9255-9489 bp Feature: domain Description: GIIM Note: maturase Location: 92 55-9489 bp Feature: domain Description: HNHc Note: nucleases Location: 9699-9858 bp Feature: domain Description: HNHc Note: nucleases Location: 9699-9858 bp Feature: gene Location: 10630-10805 bp Feature: gene Location: 10950-11069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: PCFR01000106.1 Klebsiella pneumoniae strain XPY166 NODE_146_length_121453_cov_32.491638, whole genome shotgun sequence (121571 bp)
Overview 1 RT 1: 97303-103545 bp Neighborhood of RT #1 [97303, 104075] AAA_21 RVT-Retrons RVT-Retrons STKc_PknB_like Feature: gene Location: 97303-97533 bp Feature: gene Location: 98758-100941 bp Feature: domain Description: AAA_21 Location: 98770-99709 bp Feature: domain Description: AAA_21 Location: 98770-99709 bp Feature: gene Location: 101056-101581 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101239-101581 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10123 9-101581 bp Feature: gene Location: 101841-102413 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101844-102024 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101844-102024 bp Feature: gene Location: 102660-102902 bp Feature: gene Location: 102972-104075 bp Feature: domain Description: STKc_PknB_like Location: 103104-103545 bp Feature: domain Description: STKc_PknB_like Location: 103 104-103 545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_21 (pfam13304), STKc_PknB_like (cd14014)