myRT

myRT report for GCA_002740645.1_ASM274064v1

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Seq: NXNH01000004.1 Klebsiella pneumoniae strain XPY207 NODE_4_length_113083_cov_43.320942, whole genome shotgun sequence (113201 bp)
Overview 1 RT 1: 89443-95175 bp Neighborhood of RT #1 [89443, 95705] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 89443-89673 bp Feature: gene Location: 90552-92828 bp Feature: domain Description: AAA_15 Location: 90585-91593 bp Feature: domain Description: AAA_1 5 Location: 90585-91 593 bp Feature: gene Location: 92943-94043 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93126-93654 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 931 26-93654 bp Feature: gene Location: 94290-94532 bp Feature: gene Location: 94602-95705 bp Feature: domain Description: STKc_PknB_like Location: 94734-95175 bp Feature: domain Description: STKc_PknB_like Location: 94734-951 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)

Seq: NXNH01000057.1 Klebsiella pneumoniae strain XPY207 NODE_58_length_13791_cov_57.243710, whole genome shotgun sequence (13909 bp)
Overview 1 RT 1: 7302-11069 bp Neighborhood of RT #1 [7302, 11069] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7302-7724 bp Feature: domain Description: DUF1380 Location: 7305-7599 bp Feature: domain Description: DUF1380 Location: 7305-7599 bp Feature: gene Location: 7721-7912 bp Feature: gene Location: 8226-9893 bp Feature: RT Description: RVT_N Location: 8274-8511 bp Feature: RT Description: RVT_N Location: 82 74-8511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8562-9204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8562 -92 04 bp Feature: domain Description: GIIM Note: maturase Location: 9255-9489 bp Feature: domain Description: GIIM Note: maturase Location: 92 55-9489 bp Feature: domain Description: HNHc Note: nucleases Location: 9699-9858 bp Feature: domain Description: HNHc Note: nucleases Location: 9699-9858 bp Feature: gene Location: 10630-10805 bp Feature: gene Location: 10950-11069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NXNH01000056.1 Klebsiella pneumoniae strain XPY207 NODE_57_length_1774_cov_711.049011, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII