myRT

myRT report for GCA_002741395.1_ASM274139v1

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Seq: CP024471.1 Shigella flexneri strain 71-2783 plasmid unnamed1, complete sequence (97011 bp)
Overview 1 RT 1: 72403-76330 bp Neighborhood of RT #1 [72403, 76335] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 72403-72945 bp Feature: gene Location: 73164-73373 bp Feature: gene Location: 73508-75409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73775-74606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73775-74606 bp Feature: domain Description: Intron_maturas2 Location: 74720-74978 bp Feature: domain Description: Intron_maturas2 Location: 74720-74978 bp Feature: domain Description: HNHc Note: nucleases Location: 75152-75314 bp Feature: domain Description: HNHc Note: nucleases Location: 751 52-7531 4 bp Feature: gene Location: 75604-76044 bp Feature: domain Description: PRK13732 Location: 75610-76042 bp Feature: domain Description: PRK1 3732 Location: 7561 0-76042 bp Feature: gene Location: 76102-76335 bp Feature: domain Description: DUF905 Location: 76132-76330 bp Feature: domain Description: DUF905 Location: 761 32-76330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: CP024472.1 Shigella flexneri strain 71-2783 plasmid unnamed2, complete sequence (159299 bp)
Overview 1 RT 1: 51780-55107 bp Neighborhood of RT #1 [51780, 55121] PHA02517 DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 51780-52427 bp Feature: domain Description: PHA02517 Location: 51783-52425 bp Feature: domain Description: PHA02 517 Location: 51783-52 42 5 bp Feature: gene Location: 52521-52652 bp Feature: domain Description: DDE_Tnp_IS66 Location: 52533-52626 bp Feature: domain Description: DDE_Tnp_IS66 Location: 52 533-52 62 6 bp Feature: gene Location: 53214-54347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53316-53970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53316-53970 bp Feature: domain Description: GIIM Note: maturase Location: 54048-54270 bp Feature: domain Description: GIIM Note: maturase Location: 54048-542 70 bp Feature: gene Location: 54463-54609 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 54475-54586 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 54475-54586 bp Feature: gene Location: 54636-55121 bp Feature: domain Description: COG3547 Location: 54654-55107 bp Feature: domain Description: COG3547 Location: 54654-55107 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )