myRT

myRT report for GCA_002742165.1_ASM274216v1

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Seq: PDKV01000029.1 Mycobacterium celatum strain NCTC 12882 NODE_29_length_61642_cov_72.5676, whole genome shotgun sequence (61642 bp)
Overview 1 RT 1: 30032-36243 bp Neighborhood of RT #1 [30032, 36557] AcrR NcnH RVT-GII GIIM Beta-lactamase DUF222 Feature: gene Location: 30032-30559 bp Feature: domain Description: AcrR Location: 30056-30551 bp Feature: domain Description: AcrR Location: 30056-30551 bp Feature: gene Location: 30694-31833 bp Feature: domain Description: NcnH Location: 30709-31798 bp Feature: domain Description: NcnH Location: 30709-31 798 bp Feature: gene Location: 32482-33741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32698-33355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32698-33355 bp Feature: domain Description: GIIM Note: maturase Location: 33439-33667 bp Feature: domain Description: GIIM Note: maturase Location: 33439-33667 bp Feature: gene Location: 33842-35047 bp Feature: domain Description: Beta-lactamase Location: 33899-34961 bp Feature: domain Description: Beta-lactamase Location: 33899-34961 bp Feature: gene Location: 35085-36557 bp Feature: domain Description: DUF222 Location: 35358-36243 bp Feature: domain Description: DUF222 Location: 35358-36243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), NcnH (cd01159), RVT-GII, GIIM (pfam08388), Beta-lactamase (pfam00144), DUF222 (pfam02720)

Seq: PDKV01000034.1 Mycobacterium celatum strain NCTC 12882 NODE_34_length_47515_cov_65.2096, whole genome shotgun sequence (47515 bp)
Overview 1 RT 1: 19323-26943 bp Neighborhood of RT #1 [19323, 26948] MFS_XylE_like FtsK_4TM FtsK RVT-GII GIIM YgiN SDR_subfam_1 Feature: gene Location: 19323-20672 bp Feature: domain Description: MFS_XylE_like Location: 19335-20592 bp Feature: domain Description: MFS_XylE_like Location: 19335-2 0592 bp Feature: gene Location: 21035-23491 bp Feature: domain Description: FtsK_4TM Location: 21371-21725 bp Feature: domain Description: FtsK_4TM Location: 2 1371-2 172 5 bp Feature: domain Description: FtsK Location: 21935-23435 bp Feature: domain Description: FtsK Location: 2 1935-2 3435 bp Feature: gene Location: 23602-24975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23953-24577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3953-2 4577 bp Feature: domain Description: GIIM Note: maturase Location: 24670-24883 bp Feature: domain Description: GIIM Note: maturase Location: 2 4670-2 4883 bp Feature: gene Location: 25813-26127 bp Feature: domain Description: YgiN Location: 25816-26092 bp Feature: domain Description: YgiN Location: 2 5816-2 6092 bp Feature: gene Location: 26127-26948 bp Feature: domain Description: SDR_subfam_1 Location: 26142-26943 bp Feature: domain Description: SDR_subfam_1 Location: 2 6142 -2 6943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_XylE_like (cd17359), FtsK_4TM (pfam13491), FtsK (COG1674), RVT-GII, GIIM (pfam08388), YgiN (COG1359), SDR_subfam_1 (TIGR03971)