myRT

myRT report for GCA_002743115.1_ASM274311v1

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Seq: PDYP01000004.1 Sporosarcina sp. P17b contig-150_3, whole genome shotgun sequence (322941 bp)
Overview 1 RT 1: 221896-226516 bp Neighborhood of RT #1 [221896, 226516] RadC RVT-GII rve Feature: gene Location: 221896-222285 bp Feature: domain Description: RadC Location: 222004-222268 bp Feature: domain Description: RadC Location: 222004-222268 bp Feature: gene Location: 222629-222809 bp Feature: gene Location: 222997-224877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 223324-224065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 223324-224065 bp Feature: gene Location: 224951-226042 bp Feature: domain Description: rve Location: 225491-225827 bp Feature: domain Description: rve Location: 225491 -225827 bp Feature: gene Location: 226232-226516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RadC (pfam04002), RVT-GII, rve (pfam00665)

Seq: PDYP01000013.1 Sporosarcina sp. P17b contig-150_12, whole genome shotgun sequence (81721 bp)
Overview 1 RT 1: 49858-56261 bp Neighborhood of RT #1 [49858, 56263] YrvD recJ RVT-GII recJ ssDNA-exonuc_C PRK02304 Feature: gene Location: 49858-50217 bp Feature: domain Description: YrvD Location: 49861-50089 bp Feature: domain Description: YrvD Location: 49861-50089 bp Feature: gene Location: 50632-50922 bp Feature: domain Description: recJ Location: 50716-50905 bp Feature: domain Description: recJ Location: 50716-50905 bp Feature: gene Location: 51640-53523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51964-52705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51964-52 705 bp Feature: gene Location: 53709-55760 bp Feature: domain Description: recJ Location: 53715-55098 bp Feature: domain Description: recJ Location: 53715-55098 bp Feature: domain Description: ssDNA-exonuc_C Location: 55119-55710 bp Feature: domain Description: ssDNA-exonuc_C Location: 55119-55710 bp Feature: gene Location: 55751-56263 bp Feature: domain Description: PRK02304 Location: 55757-56261 bp Feature: domain Description: PRK02 304 Location: 55757-562 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YrvD (COG5416), recJ (TIGR00644), RVT-GII, ssDNA-exonuc_C (pfam10141), PRK02304 (adenine phosphoribosyltransferase; Provisional)