myRT

myRT report for GCA_002743315.1_ASM274331v1

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Seq: PDYZ01000048.1 Sporosarcina sp. P30 contig-150_48, whole genome shotgun sequence (3782 bp)
Overview 1 RT 1: 127-3008 bp Neighborhood of RT #1 [127, 3118] RVT-GII HNHc Feature: gene Location: 127-813 bp Feature: gene Location: 1201-1302 bp Feature: gene Location: 1343-3118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1601-2300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 601 -2300 bp Feature: domain Description: HNHc Note: nucleases Location: 2876-3008 bp Feature: domain Description: HNHc Note: nucleases Location: 2876-3008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: PDYZ01000011.1 Sporosarcina sp. P30 contig-150_10, whole genome shotgun sequence (88582 bp)
Overview 1 RT 1: 18674-25100 bp Neighborhood of RT #1 [18674, 25102] YrvD recJ RVT-GII recJ ssDNA-exonuc_C PRK02304 Feature: gene Location: 18674-19033 bp Feature: domain Description: YrvD Location: 18677-18905 bp Feature: domain Description: YrvD Location: 18677-18905 bp Feature: gene Location: 19472-19762 bp Feature: domain Description: recJ Location: 19556-19745 bp Feature: domain Description: recJ Location: 19556-19745 bp Feature: gene Location: 20480-22363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20804-21545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0804-2 1545 bp Feature: gene Location: 22548-24599 bp Feature: domain Description: recJ Location: 22554-23940 bp Feature: domain Description: recJ Location: 2 2 554-2 3940 bp Feature: domain Description: ssDNA-exonuc_C Location: 23958-24549 bp Feature: domain Description: ssDNA-exonuc_C Location: 2 3958-2 4549 bp Feature: gene Location: 24590-25102 bp Feature: domain Description: PRK02304 Location: 24596-25100 bp Feature: domain Description: PRK02 304 Location: 2 4596-2 5100 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YrvD (COG5416), recJ (TIGR00644), RVT-GII, ssDNA-exonuc_C (pfam10141), PRK02304 (adenine phosphoribosyltransferase; Provisional)