myRT

myRT report for GCA_002743415.1_ASM274341v1

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Seq: PDZE01000006.1 Sporosarcina sp. P3 contig-150_5, whole genome shotgun sequence (222088 bp)
Overview 1 RT 1: 42904-49247 bp 2 RT 2: 78101-83039 bp Neighborhood of RT #1 [42904, 49375] PRK02304 recJ ssDNA-exonuc_C RVT-GII recJ YrvD Neighborhood of RT #2 [78101, 83062] PRK13927 PRK00024 RVT-GII Intron_maturas2 HNHc RadC Maf Feature: gene Location: 42904-43416 bp Ori: PID21378.1 Feature: domain Description: PRK02304 Location: 42910-43414 bp Feature: domain Description: PRK02304 Location: 4291 0-4341 4 bp Feature: gene Location: 43407-45458 bp Ori: PID21379.1 Gene: recJ Feature: domain Description: recJ Location: 43413-44799 bp Feature: domain Description: recJ Location: 4341 3-44799 bp Feature: domain Description: ssDNA-exonuc_C Location: 44817-45408 bp Feature: domain Description: ssDNA-exonuc_C Location: 4481 7-45408 bp Feature: gene Location: 45644-47527 bp Ori: PID21380.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45968-46709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45968-46709 bp Feature: gene Location: 48247-48537 bp Ori: PID21381.1 Feature: domain Description: recJ Location: 48331-48520 bp Feature: domain Description: recJ Location: 48331 -48520 bp Feature: gene Location: 49016-49375 bp Ori: PID21382.1 Feature: domain Description: YrvD Location: 49019-49247 bp Feature: domain Description: YrvD Location: 4901 9-49247 bp Feature: gene Location: 78101-79114 bp Ori: PID21413.1 Feature: domain Description: PRK13927 Location: 78110-79106 bp Feature: domain Description: PRK1 3927 Location: 781 1 0-791 06 bp Feature: gene Location: 79284-79487 bp Feature: domain Description: PRK00024 Location: 79287-79485 bp Feature: domain Description: PRK00024 Location: 79287-79485 bp Feature: gene Location: 79593-81404 bp Ori: PID21414.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79857-80688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79857-80688 bp Feature: domain Description: Intron_maturas2 Location: 80766-81171 bp Feature: domain Description: Intron_maturas2 Location: 80766-81 1 71 bp Feature: domain Description: HNHc Note: nucleases Location: 81207-81375 bp Feature: domain Description: HNHc Note: nucleases Location: 81 207-81 375 bp Feature: gene Location: 81969-82463 bp Feature: domain Description: RadC Location: 81999-82464 bp Feature: domain Description: RadC Location: 81 999-82464 bp Feature: gene Location: 82463-83062 bp Ori: PID21415.1 Gene: maf Feature: domain Description: Maf Location: 82484-83039 bp Feature: domain Description: Maf Location: 82484-83039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02304 (adenine phosphoribosyltransferase; Provisional), recJ (TIGR00644), ssDNA-exonuc_C (pfam10141), RVT-GII, YrvD (COG5416), PRK13927 (rod shape-determining protein MreB; Provisional), PRK00024 (DNA repair protein RadC), Intron_maturas2 (pfam01348), HNHc (smart00507), RadC (pfam04002)
Maf (pfam02545)

Seq: PDZE01000004.1 Sporosarcina sp. P3 contig-150_3, whole genome shotgun sequence (307953 bp)
Overview 1 RT 1: 92588-99937 bp Neighborhood of RT #1 [92588, 99937] nitrilase_8 RVT-UNC Feature: gene Location: 92588-92794 bp Feature: gene Location: 93060-93923 bp Ori: PID21899.1 Feature: domain Description: nitrilase_8 Location: 93177-93636 bp Feature: domain Description: nitrilase_8 Location: 93177-93636 bp Feature: gene Location: 93929-97159 bp Ori: PID21900.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 94835-95063 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 94835-95063 bp Feature: gene Location: 97559-98434 bp Feature: gene Location: 98579-99937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nitrilase_8 (cd07586), RVT-UG11/RVT-GII/RVT-Retrons/RVT-UG6(RVT-UNC)