myRT

myRT report for GCA_002746985.1_ASM274698v1

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Seq: NVXH01000012.1 Porticoccaceae bacterium isolate NORP16 Contig_source1383C_331, whole genome shotgun sequence (137593 bp)
Overview 1 RT 1: 77166-83351 bp Neighborhood of RT #1 [77166, 84052] RVT-UG17 SLATT_5 COG0610 Feature: gene Location: 77166-78020 bp Feature: gene Location: 78124-78486 bp Feature: gene Location: 78579-79907 bp Ori: PCJ90411.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 78807-79410 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 78807-7941 0 bp Feature: gene Location: 79898-80527 bp Ori: PCJ90412.1 Feature: domain Description: SLATT_5 Location: 79910-80501 bp Feature: domain Description: SLATT_5 Location: 7991 0-80501 bp Feature: gene Location: 80756-84052 bp Ori: PCJ90413.1 Feature: domain Description: COG0610 Location: 81278-83351 bp Feature: domain Description: COG061 0 Location: 81 278-83351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases )

Seq: NVXH01000014.1 Porticoccaceae bacterium isolate NORP16 Contig_source1383C_1208, whole genome shotgun sequence (61250 bp)
Overview 1 RT 1: 12410-19843 bp Neighborhood of RT #1 [12410, 19887] DEXDc_RapA PRK04914 HTH_17 RVT-GII PIN_Pae0151-like Phd Feature: gene Location: 12410-15358 bp Ori: PCJ90109.1 Feature: domain Description: DEXDc_RapA Location: 12521-13157 bp Feature: domain Description: DEXDc_RapA Location: 12 52 1-13157 bp Feature: domain Description: PRK04914 Location: 13928-14366 bp Feature: domain Description: PRK04914 Location: 1392 8-14366 bp Feature: gene Location: 15374-15550 bp Ori: PCJ90110.1 Feature: domain Description: HTH_17 Location: 15392-15536 bp Feature: domain Description: HTH_17 Location: 15392 -15536 bp Feature: gene Location: 17091-18407 bp Ori: PCJ90111.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17373-18054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17373-18054 bp Feature: gene Location: 19227-19651 bp Feature: domain Description: PIN_Pae0151-like Location: 19242-19536 bp Feature: domain Description: PIN_Pae0151-like Location: 192 42 -19536 bp Feature: gene Location: 19648-19887 bp Ori: PCJ90112.1 Feature: domain Description: Phd Location: 19663-19843 bp Feature: domain Description: Phd Location: 19663-19843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXDc_RapA (cd18011), PRK04914 (RNA polymerase-associated protein RapA), HTH_17 (pfam12728), RVT-GII, PIN_Pae0151-like (cd09873), Phd (COG4118)