myRT

myRT report for GCA_002747435.1_ASM274743v1

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Seq: PDPH01000052.1 Proteobacteria bacterium isolate DOLZORAL124_45_7 DolZOral124_scaffold_344, whole genome shotgun sequence (74911 bp)
Overview 1 RT 1: 105-7951 bp Neighborhood of RT #1 [105, 7959] HEAT_2 HEAT_2 HEAT_2 RVT-Retrons Xcc1710_like PRK05657 Feature: gene Location: 105-3392 bp Feature: domain Description: HEAT_2 Location: 1056-1272 bp Feature: domain Description: HEAT_2 Location: 1 056-1 272 bp Feature: domain Description: HEAT_2 Location: 1761-2016 bp Feature: domain Description: HEAT_2 Location: 1 761 -201 6 bp Feature: domain Description: HEAT_2 Location: 3198-3354 bp Feature: domain Description: HEAT_2 Location: 31 98-3354 bp Feature: gene Location: 3389-5221 bp Feature: gene Location: 5226-6512 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5676-6294 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5676-6294 bp Feature: gene Location: 6554-6940 bp Feature: domain Description: Xcc1710_like Location: 6596-6917 bp Feature: domain Description: Xcc1 71 0_like Location: 6596-691 7 bp Feature: gene Location: 6937-7959 bp Feature: domain Description: PRK05657 Location: 6979-7951 bp Feature: domain Description: PRK05657 Location: 6979-7951 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT_2 (pfam13646), RVT-Retrons, Xcc1710_like (cd05560), PRK05657 (RNA polymerase sigma factor RpoS; Validated)

Seq: PDPH01000009.1 Proteobacteria bacterium isolate DOLZORAL124_45_7 DolZOral124_scaffold_2879, whole genome shotgun sequence (25304 bp)
Overview 1 RT 1: 14847-19825 bp Neighborhood of RT #1 [14847, 19866] OmpA_membrane OmpA_membrane AmyAc_Amylosucrase RVT-Retrons SWIM Feature: gene Location: 14847-15467 bp Feature: domain Description: OmpA_membrane Location: 14976-15456 bp Feature: domain Description: OmpA_membrane Location: 14976-15456 bp Feature: gene Location: 15477-16148 bp Feature: domain Description: OmpA_membrane Location: 15627-16137 bp Feature: domain Description: OmpA_membrane Location: 1562 7-16137 bp Feature: gene Location: 16222-17901 bp Feature: domain Description: AmyAc_Amylosucrase Location: 16360-16657 bp Feature: domain Description: AmyAc_Amylosucrase Location: 16360-16657 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16762-17380 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16762 -17380 bp Feature: gene Location: 17894-18211 bp Feature: gene Location: 18211-19866 bp Feature: domain Description: SWIM Location: 19732-19825 bp Feature: domain Description: SWIM Location: 19732 -1982 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OmpA_membrane (pfam01389), AmyAc_Amylosucrase (cd11324), RVT-Retrons, SWIM (pfam04434)