myRT

myRT report for GCA_002747525.1_ASM274752v1

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Seq: PDPS01000029.1 Candidate division KSB3 bacterium isolate DOLZORAL124_49_17 DolZOral124_scaffold_57, whole genome shotgun sequence (135735 bp)
Overview 1 RT 1: 1-2435 bp Neighborhood of RT #1 [1, 2435] RVT_N RVT-GII GIIM Cas2_I_II_III Feature: gene Location: 1-1392 bp Feature: RT Description: RVT_N Location: 16-259 bp Feature: RT Description: RVT_N Location: 1 6-259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304-934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304-934 bp Feature: domain Description: GIIM Note: maturase Location: 988-1219 bp Feature: domain Description: GIIM Note: maturase Location: 988-1 21 9 bp Feature: gene Location: 1472-1747 bp Feature: domain Description: Cas2_I_II_III Location: 1484-1709 bp Feature: domain Description: Cas2_I_II_III Location: 1 484-1 709 bp Feature: gene Location: 1794-2435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Cas2_I_II_III (cl11442)

Seq: PDPS01000014.1 Candidate division KSB3 bacterium isolate DOLZORAL124_49_17 DolZOral124_scaffold_17356, whole genome shotgun sequence (9945 bp)
Overview 1 RT 1: 681-5508 bp Neighborhood of RT #1 [681, 5508] Peptidase_C14 YfmG Avd_like RVT-DGRs KOG1546 DUF4384 Feature: gene Location: 681-2705 bp Feature: domain Description: Peptidase_C14 Location: 813-1635 bp Feature: domain Description: Peptidase_C14 Location: 813-1635 bp Feature: domain Description: YfmG Location: 1776-2691 bp Feature: domain Description: YfmG Location: 1776-2 691 bp Feature: gene Location: 2801-3148 bp Feature: domain Description: Avd_like Location: 2819-3125 bp Feature: domain Description: Avd_like Location: 2 819-312 5 bp Feature: gene Location: 3145-3773 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3349-3664 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3349-3664 bp Feature: gene Location: 3921-5273 bp Feature: domain Description: KOG1546 Location: 3987-4419 bp Feature: domain Description: KOG1546 Location: 3987-4419 bp Feature: domain Description: DUF4384 Location: 4875-5109 bp Feature: domain Description: DUF4384 Location: 4875-5109 bp Feature: gene Location: 5290-5508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, KOG1546 (KOG1546, Metacaspase involved in regulation of apoptosis ), DUF4384 (pfam14326), Peptidase_C14 (pfam00656), YfmG (COG1262)