myRT

myRT report for GCA_002748965.1_ASM274896v1

Download annotations/find similar RTs

Seq: PDTR01000116.1 Candidatus Delongbacteria bacterium isolate DOLJORAL78_31_13 DolJOral78_scaffold_178_curated, whole genome shotgun sequence (93479 bp)
Overview 1 RT 1: 79344-83506 bp Neighborhood of RT #1 [79344, 83523] Cas2_I_II_III RVT-CRISPR GIIM Cas1_I-II-III CRISPR_Cas6 YmaB Feature: gene Location: 79344-79631 bp Ori: PIE78636.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 79359-79587 bp Feature: domain Description: Cas2_I_II_III Location: 79359-79587 bp Feature: gene Location: 79653-81926 bp Ori: PIE78637.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 79875-80493 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 79875-80493 bp Feature: domain Description: GIIM Note: maturase Location: 80550-80715 bp Feature: domain Description: GIIM Note: maturase Location: 80550-8071 5 bp Feature: domain Description: Cas1_I-II-III Location: 80928-81876 bp Feature: domain Description: Cas1 _I-II-III Location: 80928-81 876 bp Feature: gene Location: 81960-82907 bp Ori: PIE78638.1 Feature: domain Description: CRISPR_Cas6 Location: 82527-82887 bp Feature: domain Description: CRISPR_Cas6 Location: 82527-82887 bp Feature: gene Location: 82909-83523 bp Ori: PIE78639.1 Feature: domain Description: YmaB Location: 82918-83506 bp Feature: domain Description: YmaB Location: 8291 8-83506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, GIIM (pfam08388), Cas1_I-II-III (cl00656), CRISPR_Cas6 (pfam10040), YmaB (COG4112)

Seq: PDTR01000091.1 Candidatus Delongbacteria bacterium isolate DOLJORAL78_31_13 DolJOral78_scaffold_23019_curated, whole genome shotgun sequence (3997 bp)
Overview 1 RT 1: 278-3997 bp Neighborhood of RT #1 [278, 3997] DUF4261 RVT-UG15 Feature: gene Location: 278-1030 bp Feature: gene Location: 1143-1931 bp Ori: PIE78978.1 Feature: domain Description: DUF4261 Location: 1704-1926 bp Feature: domain Description: DUF42 61 Location: 1704-192 6 bp Feature: gene Location: 2177-3697 bp Ori: PIE78979.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 2603-3005 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 2 603-3005 bp Feature: gene Location: 3900-3997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4261 (pfam14080), RVT-UG15

Seq: PDTR01000044.1 Candidatus Delongbacteria bacterium isolate DOLJORAL78_31_13 DolJOral78_scaffold_1306_curated, whole genome shotgun sequence (31607 bp)
Overview 1 RT 1: 1-5945 bp Neighborhood of RT #1 [1, 5950] Hrd RVT-DGRs DUF4837 cysS Feature: gene Location: 1-1378 bp Feature: gene Location: 1543-1992 bp Ori: PIE79754.1 Feature: domain Description: Hrd Location: 1792-1978 bp Feature: domain Description: Hrd Location: 1792-1978 bp Feature: gene Location: 2030-3049 bp Ori: PIE79755.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2240-2822 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2240-2822 bp Feature: gene Location: 3547-4536 bp Ori: PIE79756.1 Feature: domain Description: DUF4837 Location: 3625-4516 bp Feature: domain Description: DUF483 7 Location: 3 625-4516 bp Feature: gene Location: 4520-5950 bp Ori: PIE79757.1 Feature: domain Description: cysS Location: 4523-5945 bp Feature: domain Description: cysS Location: 4523 -5945 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Hrd (LOAD_Hrd), RVT-DGRs, DUF4837 (pfam16125), cysS (TIGR00435)