myRT

myRT report for GCA_002750495.1_ASM275049v1

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Seq: PEJN01000026.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_26, whole genome shotgun sequence (93949 bp)
Overview 1 RT 1: 90384-93808 bp Neighborhood of RT #1 [90384, 93949] YebA COG3241 RVT-GII GIIM Feature: gene Location: 90384-91277 bp Ori: PIH88957.1 Feature: domain Description: YebA Location: 90402-91257 bp Feature: domain Description: YebA Location: 90402-91 257 bp Feature: gene Location: 91433-91879 bp Ori: PIH88958.1 Gene: azu Feature: domain Description: COG3241 Location: 91439-91877 bp Feature: domain Description: COG3241 Location: 91 439-91 877 bp Feature: gene Location: 92698-93949 bp Ori: PIH88959.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92938-93553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92938-93553 bp Feature: domain Description: GIIM Note: maturase Location: 93598-93808 bp Feature: domain Description: GIIM Note: maturase Location: 93598-93808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YebA (COG1305), COG3241 (Azurin ), RVT-GII, GIIM (pfam08388)

Seq: PEJN01000033.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_33, whole genome shotgun sequence (20899 bp)
Overview 1 RT 1: 505-3967 bp Neighborhood of RT #1 [505, 3993] RVT-GII GIIM nadE PRK05321 Feature: gene Location: 505-1788 bp Ori: PIH88688.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1615 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1615 bp Feature: gene Location: 1916-2743 bp Ori: PIH88689.1 Gene: nadE Feature: domain Description: nadE Location: 1928-2738 bp Feature: domain Description: nadE Location: 192 8-2 738 bp Feature: gene Location: 2770-3993 bp Ori: PIH88690.1 Gene: pncB Feature: domain Description: PRK05321 Location: 2788-3967 bp Feature: domain Description: PRK0532 1 Location: 2 788-3967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), nadE (TIGR00552), PRK05321 (nicotinate phosphoribosyltransferase; Provisional)

Seq: PEJN01000231.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_232, whole genome shotgun sequence (12072 bp)
Overview 1 RT 1: 7111-11931 bp Neighborhood of RT #1 [7111, 12072] PRK08186 urea_carbox RVT-GII GIIM Feature: gene Location: 7111-8925 bp Ori: PIH84059.1 Gene: atzF Feature: domain Description: PRK08186 Location: 7135-8920 bp Feature: domain Description: PRK08186 Location: 713 5-8920 bp Feature: gene Location: 8961-10364 bp Ori: PIH84061.1 Feature: domain Description: urea_carbox Location: 9117-10353 bp Feature: domain Description: urea_carbox Location: 9117-103 53 bp Feature: gene Location: 10821-12072 bp Ori: PIH84060.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11061-11676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11061-11676 bp Feature: domain Description: GIIM Note: maturase Location: 11721-11931 bp Feature: domain Description: GIIM Note: maturase Location: 11721-1193 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08186 (allophanate hydrolase; Provisional), urea_carbox (TIGR02712), RVT-GII, GIIM (pfam08388)

Seq: PEJN01000012.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_12, whole genome shotgun sequence (124162 bp)
Overview 1 RT 1: 505-3400 bp 2 RT 2: 121287-124021 bp Neighborhood of RT #1 [505, 3441] RVT-GII GIIM RutF GT_2_like_f Neighborhood of RT #2 [121287, 124162] SsuD RVT-GII GIIM Feature: gene Location: 505-1788 bp Ori: PIH89270.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74 5-1360 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1615 bp Feature: domain Description: GIIM Note: maturase Location: 14 05-1615 bp Feature: gene Location: 2090-2674 bp Ori: PIH89271.1 Feature: domain Description: RutF Location: 2123-2636 bp Feature: domain Description: RutF Location: 2123-2636 bp Feature: gene Location: 2848-3441 bp Ori: PIH89357.1 Feature: domain Description: GT_2_like_f Location: 2854-3400 bp Feature: domain Description: GT_2_like_f Location: 2854 -34 00 bp Feature: gene Location: 121287-122324 bp Ori: PIH89354.1 Feature: domain Description: SsuD Location: 121344-122283 bp Feature: domain Description: SsuD Location: 12134 4 -122283 bp Feature: gene Location: 122284-122463 bp Feature: gene Location: 122911-124162 bp Ori: PIH89356.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123151-123766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123151-123766 bp Feature: domain Description: GIIM Note: maturase Location: 123811-124021 bp Feature: domain Description: GIIM Note: maturase Location: 123811-124 021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RutF (TIGR03615), GT_2_like_f (cd04182), SsuD (COG2141)

Seq: PEJN01000238.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_239, whole genome shotgun sequence (37355 bp)
Overview 1 RT 1: 35243-37214 bp Neighborhood of RT #1 [35243, 37355] ArfA RVT-GII GIIM Feature: gene Location: 35243-35398 bp Ori: PIH84012.1 Feature: domain Description: ArfA Location: 35255-35381 bp Feature: domain Description: ArfA Location: 35 25 5 -35 381 bp Feature: gene Location: 35414-35656 bp Feature: gene Location: 36104-37355 bp Ori: PIH84014.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36344-36959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36344-3695 9 bp Feature: domain Description: GIIM Note: maturase Location: 37004-37214 bp Feature: domain Description: GIIM Note: maturase Location: 37004-37214 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArfA (COG3036), RVT-GII, GIIM (pfam08388)

Seq: PEJN01000028.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_28, whole genome shotgun sequence (6223 bp)
Overview 1 RT 1: 2662-6131 bp Neighborhood of RT #1 [2662, 6223] UvrD_C RVT-UG9 HTH_28 Feature: gene Location: 2662-3606 bp Feature: gene Location: 3967-4557 bp Ori: PIH88841.1 Feature: domain Description: UvrD_C Location: 4291-4486 bp Feature: domain Description: UvrD_C Location: 4291-4486 bp Feature: gene Location: 4655-5794 bp Ori: PIH88842.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 4658-5042 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 46 58-5042 bp Feature: gene Location: 5885-6223 bp Ori: PIH88843.1 Feature: domain Description: HTH_28 Location: 5978-6131 bp Feature: domain Description: HTH_28 Location: 5978-6 131 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrD_C (pfam13361), RVT-UG9, HTH_28 (pfam13518)

Seq: PEJN01000092.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_93, whole genome shotgun sequence (18236 bp)
Overview 1 RT 1: 13830-18095 bp Neighborhood of RT #1 [13830, 18236] GabT GDH_like_2 RVT-GII GIIM Feature: gene Location: 13830-15134 bp Ori: PIH87296.1 Gene: gabT Feature: domain Description: GabT Location: 13857-15120 bp Feature: domain Description: GabT Location: 13857 -15120 bp Feature: gene Location: 15383-16348 bp Ori: PIH87299.1 Feature: domain Description: GDH_like_2 Location: 15431-16337 bp Feature: domain Description: GDH_like_2 Location: 15431-16337 bp Feature: gene Location: 16985-18236 bp Ori: PIH87297.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17225-17840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17 225-17 840 bp Feature: domain Description: GIIM Note: maturase Location: 17885-18095 bp Feature: domain Description: GIIM Note: maturase Location: 17 885-18095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GabT (COG0160), GDH_like_2 (cd12164), RVT-GII, GIIM (pfam08388)

Seq: PEJN01000034.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_34, whole genome shotgun sequence (67286 bp)
Overview 1 RT 1: 1-2570 bp Neighborhood of RT #1 [1, 2608] RVT-GII GIIM YdhL LbH_gamma_CA_like Feature: gene Location: 1-1252 bp Ori: PIH88626.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-8 56 bp Feature: domain Description: GIIM Note: maturase Location: 901-1111 bp Feature: domain Description: GIIM Note: maturase Location: 901-1111 bp Feature: gene Location: 1866-2084 bp Ori: PIH88627.1 Feature: domain Description: YdhL Location: 1893-2049 bp Feature: domain Description: YdhL Location: 18 93-2049 bp Feature: gene Location: 2084-2608 bp Ori: PIH88628.1 Feature: domain Description: LbH_gamma_CA_like Location: 2120-2570 bp Feature: domain Description: LbH_gamma_CA_like Location: 2120-2570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YdhL (COG3313), LbH_gamma_CA_like (cd04645)

Seq: PEJN01000075.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_76, whole genome shotgun sequence (38558 bp)
Overview 1 RT 1: 1768-7731 bp Neighborhood of RT #1 [1768, 7739] DUF2625 RVT-GII Intron_maturas2 HNHc Top1 modC_ABC Feature: gene Location: 1768-2403 bp Ori: PIH87768.1 Feature: domain Description: DUF2625 Location: 1780-2368 bp Feature: domain Description: DUF2625 Location: 1780-2368 bp Feature: gene Location: 2410-2601 bp Feature: gene Location: 2841-4676 bp Ori: PIH87770.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3102-3915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3102-39 15 bp Feature: domain Description: Intron_maturas2 Location: 4011-4326 bp Feature: domain Description: Intron_maturas2 Location: 4011-4326 bp Feature: domain Description: HNHc Note: nucleases Location: 4449-4614 bp Feature: domain Description: HNHc Note: nucleases Location: 4449 -4614 bp Feature: gene Location: 5507-6562 bp Ori: PIH87771.1 Feature: domain Description: Top1 Location: 5540-6554 bp Feature: domain Description: Top1 Location: 5540-6554 bp Feature: gene Location: 6651-7739 bp Ori: PIH87772.1 Gene: modC Feature: domain Description: modC_ABC Location: 6666-7731 bp Feature: domain Description: modC_ABC Location: 6666-7731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2625 (pfam10946), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Top1 (COG3569), modC_ABC (TIGR02142)

Seq: PEJN01000168.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_169, whole genome shotgun sequence (49237 bp)
Overview 1 RT 1: 42382-49237 bp Neighborhood of RT #1 [42382, 49237] trans_reg_C ComA-like_MBL-fold RVT-Retrons COG3666 DDE_Tnp_1_6 Feature: gene Location: 42382-42705 bp Ori: PIH85769.1 Feature: domain Description: trans_reg_C Location: 42406-42616 bp Feature: domain Description: trans_reg_C Location: 42406-42616 bp Feature: gene Location: 43512-44930 bp Ori: PIH85770.1 Feature: domain Description: ComA-like_MBL-fold Location: 44061-44547 bp Feature: domain Description: ComA-like_MBL-fold Location: 44061-44547 bp Feature: gene Location: 45374-47083 bp Ori: PIH85771.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45527-46124 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45527-46124 bp Feature: gene Location: 47581-48765 bp Feature: domain Description: COG3666 Location: 47623-48064 bp Feature: domain Description: COG3666 Location: 47623-48064 bp Feature: domain Description: DDE_Tnp_1_6 Location: 48541-48748 bp Feature: domain Description: DDE_Tnp_1_6 Location: 48541-48748 bp Feature: gene Location: 48805-49237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trans_reg_C (cd00383), ComA-like_MBL-fold (cd07731), RVT-Retrons, COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751)

Seq: PEJN01000021.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_21, whole genome shotgun sequence (42158 bp)
Overview 1 RT 1: 505-5115 bp Neighborhood of RT #1 [505, 5123] RVT-GII GIIM urea_carbox urea_degr_1 Feature: gene Location: 505-1788 bp Ori: PIH89122.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1615 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1615 bp Feature: gene Location: 1901-4396 bp Feature: domain Description: urea_carbox Location: 1907-4202 bp Feature: domain Description: urea_carbox Location: 1907-4202 bp Feature: gene Location: 4506-5123 bp Ori: PIH89123.1 Feature: domain Description: urea_degr_1 Location: 4533-5115 bp Feature: domain Description: urea_degr_1 Location: 4533-511 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), urea_carbox (TIGR02712), urea_degr_1 (TIGR03424)

Seq: PEJN01000004.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_4, whole genome shotgun sequence (74216 bp)
Overview 1 RT 1: 4-2971 bp Neighborhood of RT #1 [4, 2971] RVT-GII GIIM TnpB_IS66 Feature: gene Location: 4-1272 bp Ori: PIH89516.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208-865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208-865 bp Feature: domain Description: GIIM Note: maturase Location: 943-1165 bp Feature: domain Description: GIIM Note: maturase Location: 943-1165 bp Feature: gene Location: 1679-1984 bp Ori: PIH89559.1 Feature: domain Description: TnpB_IS66 Location: 1706-1859 bp Feature: domain Description: TnpB_IS66 Location: 1706-1859 bp Feature: gene Location: 2645-2971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TnpB_IS66 (pfam05717)

Seq: PEJN01000087.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_88, whole genome shotgun sequence (64740 bp)
Overview 1 RT 1: 51640-64599 bp Neighborhood of RT #1 [51640, 64740] PRK12467 PRK12467 A_NRPS PRK12467 FhuE RVT-GII GIIM Feature: gene Location: 51640-60261 bp Ori: PIH87541.1 Feature: domain Description: PRK12467 Location: 51643-54475 bp Feature: domain Description: PRK12467 Location: 51643-54475 bp Feature: domain Description: PRK12467 Location: 54490-57577 bp Feature: domain Description: PRK12467 Location: 54490-57577 bp Feature: domain Description: A_NRPS Location: 57661-59101 bp Feature: domain Description: A_NRPS Location: 57661-59101 bp Feature: domain Description: PRK12467 Location: 59170-60004 bp Feature: domain Description: PRK12467 Location: 59170-60004 bp Feature: gene Location: 60398-62803 bp Ori: PIH87542.1 Feature: domain Description: FhuE Location: 60689-62801 bp Feature: domain Description: FhuE Location: 60689-62801 bp Feature: gene Location: 63489-64740 bp Ori: PIH87543.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63729-64344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63729-64344 bp Feature: domain Description: GIIM Note: maturase Location: 64389-64599 bp Feature: domain Description: GIIM Note: maturase Location: 64389-64599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12467 (peptide synthase; Provisional), A_NRPS (cd05930), FhuE (COG4773), RVT-GII, GIIM (pfam08388)

Seq: PEJN01000099.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_100, whole genome shotgun sequence (23971 bp)
Overview 1 RT 1: 505-4470 bp Neighborhood of RT #1 [505, 4470] RVT-GII GIIM FhuE Feature: gene Location: 505-1788 bp Ori: PIH87175.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1615 bp Feature: domain Description: GIIM Note: maturase Location: 14 05-1615 bp Feature: gene Location: 1932-4163 bp Ori: PIH87176.1 Feature: domain Description: FhuE Location: 2010-4161 bp Feature: domain Description: FhuE Location: 2010-4161 bp Feature: gene Location: 4162-4470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), FhuE (COG4773)

Seq: PEJN01000032.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_32, whole genome shotgun sequence (18536 bp)
Overview 1 RT 1: 14736-17859 bp Neighborhood of RT #1 [14736, 18032] HisM PBP2_Mlr3796_like RVT-GII GIIM Feature: gene Location: 14736-15398 bp Ori: PIH88721.1 Feature: domain Description: HisM Location: 14763-15393 bp Feature: domain Description: HisM Location: 14763-15 393 bp Feature: gene Location: 15462-16313 bp Ori: PIH88722.1 Feature: domain Description: PBP2_Mlr3796_like Location: 15561-16254 bp Feature: domain Description: PBP2_Mlr3796_like Location: 15 561-16254 bp Feature: gene Location: 16749-18032 bp Ori: PIH88723.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16989-17604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16989-17604 bp Feature: domain Description: GIIM Note: maturase Location: 17649-17859 bp Feature: domain Description: GIIM Note: maturase Location: 17649-17859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HisM (COG0765), PBP2_Mlr3796_like (cd13695), RVT-GII, GIIM (pfam08388)

Seq: PEJN01000073.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_74, whole genome shotgun sequence (55893 bp)
Overview 1 RT 1: 50485-55216 bp Neighborhood of RT #1 [50485, 55389] GAF PAS PRK10060 PRK00058 RVT-GII GIIM Feature: gene Location: 50485-53178 bp Ori: PIH87863.1 Feature: domain Description: GAF Location: 51064-51478 bp Feature: domain Description: GAF Location: 51064-51478 bp Feature: domain Description: PAS Location: 51523-51694 bp Feature: domain Description: PAS Location: 51523-516 94 bp Feature: domain Description: PRK10060 Location: 51829-53158 bp Feature: domain Description: PRK10060 Location: 51829-53158 bp Feature: gene Location: 53325-53972 bp Ori: PIH87864.1 Feature: domain Description: PRK00058 Location: 53346-53967 bp Feature: domain Description: PRK00058 Location: 53346-53967 bp Feature: gene Location: 54106-55389 bp Ori: PIH87865.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54346-54961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54346-54961 bp Feature: domain Description: GIIM Note: maturase Location: 55006-55216 bp Feature: domain Description: GIIM Note: maturase Location: 55006-55216 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GAF (smart00065), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK00058 (peptide-methionine (S)-S-oxide reductase MsrA), RVT-GII, GIIM (pfam08388)

Seq: PEJN01000188.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_189, whole genome shotgun sequence (46367 bp)
Overview 1 RT 1: 1-2237 bp Neighborhood of RT #1 [1, 2266] RVT-GII GIIM PAAR_motif Feature: gene Location: 1-211 bp Feature: gene Location: 208-1476 bp Ori: PIH85140.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412-1069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412-1069 bp Feature: domain Description: GIIM Note: maturase Location: 1147-1369 bp Feature: domain Description: GIIM Note: maturase Location: 1147-1369 bp Feature: gene Location: 1519-2001 bp Feature: gene Location: 2012-2266 bp Ori: PIH85142.1 Feature: domain Description: PAAR_motif Location: 2036-2237 bp Feature: domain Description: PAAR_motif Location: 2036-2237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PAAR_motif (pfam05488)

Seq: PEJN01000008.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_8, whole genome shotgun sequence (87027 bp)
Overview 1 RT 1: 83603-86770 bp Neighborhood of RT #1 [83603, 86943] YdhU TAT_signal bact_SO_family_Moco RVT-GII GIIM Feature: gene Location: 83603-84223 bp Ori: PIH89449.1 Feature: domain Description: YdhU Location: 83621-84176 bp Feature: domain Description: YdhU Location: 83621-84176 bp Feature: gene Location: 84220-84990 bp Ori: PIH89450.1 Feature: domain Description: TAT_signal Location: 84295-84358 bp Feature: domain Description: TAT_signal Location: 84295-84358 bp Feature: domain Description: bact_SO_family_Moco Location: 84454-84982 bp Feature: domain Description: bact_SO_family_Moco Location: 84454-84982 bp Feature: gene Location: 85660-86943 bp Ori: PIH89451.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85900-86515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85900-86515 bp Feature: domain Description: GIIM Note: maturase Location: 86560-86770 bp Feature: domain Description: GIIM Note: maturase Location: 86560-86770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdhU (COG4117), TAT_signal (pfam10518), bact_SO_family_Moco (cd02108), RVT-GII, GIIM (pfam08388)

Seq: PEJN01000220.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_221, whole genome shotgun sequence (4443 bp)
Overview 1 RT 1: 3005-4443 bp Neighborhood of RT #1 [3005, 4443] IstB_IS21 RVT-GII Feature: gene Location: 3005-3118 bp Feature: gene Location: 3110-3451 bp Ori: PIH84424.1 Feature: domain Description: IstB_IS21 Location: 3116-3383 bp Feature: domain Description: IstB_IS21 Location: 3116-3383 bp Feature: gene Location: 3450-3655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3474-3642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3474-3642 bp Feature: gene Location: 4040-4443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21 (pfam01695), RVT-GII

Seq: PEJN01000031.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_31, whole genome shotgun sequence (21568 bp)
Overview 1 RT 1: 1-3442 bp Neighborhood of RT #1 [1, 3447] RVT-GII GIIM PRK13968 Feature: gene Location: 1-1252 bp Ori: PIH88725.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: domain Description: GIIM Note: maturase Location: 901-1111 bp Feature: domain Description: GIIM Note: maturase Location: 901-1111 bp Feature: gene Location: 1700-1987 bp Feature: gene Location: 2056-3447 bp Ori: PIH88726.1 Feature: domain Description: PRK13968 Location: 2065-3442 bp Feature: domain Description: PRK13968 Location: 20 65-3442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK13968 (putative succinate semialdehyde dehydrogenase; Provisional)

Seq: PEJN01000210.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_211, whole genome shotgun sequence (64117 bp)
Overview 1 RT 1: 61848-63908 bp Neighborhood of RT #1 [61848, 64042] PRK15441 RVT-GII GIIM Feature: gene Location: 61848-62123 bp Ori: PIH84584.1 Feature: domain Description: PRK15441 Location: 61857-62121 bp Feature: domain Description: PRK15441 Location: 61857-621 21 bp Feature: gene Location: 62393-62673 bp Feature: gene Location: 62675-64042 bp Ori: PIH84585.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63008-63623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63008-63623 bp Feature: domain Description: GIIM Note: maturase Location: 63680-63908 bp Feature: domain Description: GIIM Note: maturase Location: 63680-63908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15441 (peptidyl-prolyl cis-trans isomerase C; Provisional), RVT-GII, GIIM (pfam08388)

Seq: PEJN01000109.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_110, whole genome shotgun sequence (32914 bp)
Overview 1 RT 1: 30463-32600 bp Neighborhood of RT #1 [30463, 32707] RVT-GII GIIM Feature: gene Location: 30463-31179 bp Feature: gene Location: 31238-31384 bp Feature: gene Location: 31439-32707 bp Ori: PIH87044.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31643-32300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31643-32300 bp Feature: domain Description: GIIM Note: maturase Location: 32378-32600 bp Feature: domain Description: GIIM Note: maturase Location: 32378-32600 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PEJN01000131.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_132, whole genome shotgun sequence (9011 bp)
Overview 1 RT 1: 6190-8870 bp Neighborhood of RT #1 [6190, 9011] Hemerythrin RVT-GII GIIM Feature: gene Location: 6190-6672 bp Ori: PIH86688.1 Feature: domain Description: Hemerythrin Location: 6238-6589 bp Feature: domain Description: Hemerythrin Location: 623 8-6589 bp Feature: gene Location: 6685-7080 bp Feature: gene Location: 7760-9011 bp Ori: PIH86690.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8000-8615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8000-8615 bp Feature: domain Description: GIIM Note: maturase Location: 8660-8870 bp Feature: domain Description: GIIM Note: maturase Location: 8660-8870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Hemerythrin (TIGR00058), RVT-GII, GIIM (pfam08388)

Seq: PEJN01000178.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_179, whole genome shotgun sequence (140047 bp)
Overview 1 RT 1: 137510-139370 bp Neighborhood of RT #1 [137510, 139543] YhhQ RVT-GII GIIM Feature: gene Location: 137510-137977 bp Ori: PIH85461.1 Feature: domain Description: YhhQ Location: 137585-137900 bp Feature: domain Description: YhhQ Location: 137585-137900 bp Feature: gene Location: 137976-138191 bp Feature: gene Location: 138260-139543 bp Ori: PIH85463.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138500-139115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138500-139115 bp Feature: domain Description: GIIM Note: maturase Location: 139160-139370 bp Feature: domain Description: GIIM Note: maturase Location: 139160-139370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhQ (COG1738), RVT-GII, GIIM (pfam08388)

Seq: PEJN01000224.1 Pseudomonas syringae pv. actinidiae strain Psa JA12 PSA13_contig_225, whole genome shotgun sequence (6982 bp)
Overview 1 RT 1: 3950-6841 bp Neighborhood of RT #1 [3950, 6982] RlmJ RVT-GII GIIM Feature: gene Location: 3950-4210 bp Feature: gene Location: 4209-5045 bp Ori: PIH84354.1 Feature: domain Description: RlmJ Location: 4212-5040 bp Feature: domain Description: RlmJ Location: 4212-5040 bp Feature: gene Location: 5731-6982 bp Ori: PIH84355.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5971-6586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5971-6586 bp Feature: domain Description: GIIM Note: maturase Location: 6631-6841 bp Feature: domain Description: GIIM Note: maturase Location: 6631-6841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RlmJ (COG2961), RVT-GII, GIIM (pfam08388)