myRT

myRT report for GCA_002750505.1_ASM275050v1

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Seq: PEJL01000081.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 ABySS_275_len:23880, whole genome shotgun sequence (23880 bp)
Overview 1 RT 1: 19411-23203 bp Neighborhood of RT #1 [19411, 23376] FhuE RVT-GII GIIM Feature: gene Location: 19411-19719 bp Feature: gene Location: 19718-21949 bp Ori: PIH99727.1 Feature: domain Description: FhuE Location: 19796-21947 bp Feature: domain Description: FhuE Location: 1 9796-21 947 bp Feature: gene Location: 22093-23376 bp Ori: PIH99728.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22333-22948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22333-22948 bp Feature: domain Description: GIIM Note: maturase Location: 22993-23203 bp Feature: domain Description: GIIM Note: maturase Location: 22993-23203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FhuE (COG4773), RVT-GII, GIIM (pfam08388)

Seq: PEJL01000054.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 ABySS_223_len:6281, whole genome shotgun sequence (6281 bp)
Overview 1 RT 1: 2662-6131 bp Neighborhood of RT #1 [2662, 6281] UvrD_C RVT-UG9 HTH_28 Feature: gene Location: 2662-3606 bp Feature: gene Location: 3967-4557 bp Ori: PII00313.1 Feature: domain Description: UvrD_C Location: 4291-4486 bp Feature: domain Description: UvrD_C Location: 42 91-4486 bp Feature: gene Location: 4655-5794 bp Ori: PII00314.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 4658-5042 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 4658-5042 bp Feature: gene Location: 5885-6281 bp Ori: PII00315.1 Feature: domain Description: HTH_28 Location: 5978-6131 bp Feature: domain Description: HTH_2 8 Location: 5978-6131 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrD_C (pfam13361), RVT-UG9, HTH_28 (pfam13518)

Seq: PEJL01000063.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 ABySS_385_len:20743, whole genome shotgun sequence (20743 bp)
Overview 1 RT 1: 16751-20066 bp Neighborhood of RT #1 [16751, 20239] PRK05321 nadE RVT-GII GIIM Feature: gene Location: 16751-17974 bp Ori: PII00186.1 Gene: pncB Feature: domain Description: PRK05321 Location: 16769-17948 bp Feature: domain Description: PRK053 21 Location: 16769-17948 bp Feature: gene Location: 18001-18828 bp Ori: PII00187.1 Gene: nadE Feature: domain Description: nadE Location: 18013-18823 bp Feature: domain Description: nadE Location: 18013 -18823 bp Feature: gene Location: 18956-20239 bp Ori: PII00188.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19196-19811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19196-19811 bp Feature: domain Description: GIIM Note: maturase Location: 19856-20066 bp Feature: domain Description: GIIM Note: maturase Location: 19856-20066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05321 (nicotinate phosphoribosyltransferase; Provisional), nadE (TIGR00552), RVT-GII, GIIM (pfam08388)

Seq: PEJL01000162.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 ABySS_260_len:18229, whole genome shotgun sequence (18229 bp)
Overview 1 RT 1: 13823-18088 bp Neighborhood of RT #1 [13823, 18229] GabT GDH_like_2 RVT-GII GIIM Feature: gene Location: 13823-15127 bp Ori: PIH96553.1 Gene: gabT Feature: domain Description: GabT Location: 13850-15113 bp Feature: domain Description: GabT Location: 13850-15113 bp Feature: gene Location: 15376-16341 bp Ori: PIH96556.1 Feature: domain Description: GDH_like_2 Location: 15424-16330 bp Feature: domain Description: GDH_like_2 Location: 154 24 -16330 bp Feature: gene Location: 16978-18229 bp Ori: PIH96554.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17218-17833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17218-17833 bp Feature: domain Description: GIIM Note: maturase Location: 17878-18088 bp Feature: domain Description: GIIM Note: maturase Location: 17878-18088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GabT (COG0160), GDH_like_2 (cd12164), RVT-GII, GIIM (pfam08388)

Seq: PEJL01000090.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 ABySS_292_len:139216, whole genome shotgun sequence (139216 bp)
Overview 1 RT 1: 136639-138499 bp Neighborhood of RT #1 [136639, 138672] YhhQ RVT-GII GIIM Feature: gene Location: 136639-137106 bp Ori: PIH99536.1 Feature: domain Description: YhhQ Location: 136714-137029 bp Feature: domain Description: YhhQ Location: 136714-137029 bp Feature: gene Location: 137105-137320 bp Feature: gene Location: 137389-138672 bp Ori: PIH99538.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137629-138244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137629-138244 bp Feature: domain Description: GIIM Note: maturase Location: 138289-138499 bp Feature: domain Description: GIIM Note: maturase Location: 138289-138499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhQ (COG1738), RVT-GII, GIIM (pfam08388)

Seq: PEJL01000073.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 PERGA_16_len:33088, whole genome shotgun sequence (33088 bp)
Overview 1 RT 1: 539-3301 bp Neighborhood of RT #1 [539, 3389] RVT-GII GIIM DUF3304 Feature: gene Location: 539-1807 bp Ori: PIH99825.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743-1400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743-1400 bp Feature: domain Description: GIIM Note: maturase Location: 1478-1700 bp Feature: domain Description: GIIM Note: maturase Location: 1478-1700 bp Feature: gene Location: 1808-3006 bp Feature: gene Location: 3070-3389 bp Feature: domain Description: DUF3304 Location: 3076-3301 bp Feature: domain Description: DUF3304 Location: 3076 -3301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3304 (pfam11745)

Seq: PEJL01000019.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 ABySS_270_len:9138, whole genome shotgun sequence (9138 bp)
Overview 1 RT 1: 6317-8997 bp Neighborhood of RT #1 [6317, 9138] Hemerythrin RVT-GII GIIM Feature: gene Location: 6317-6799 bp Ori: PII01059.1 Feature: domain Description: Hemerythrin Location: 6365-6716 bp Feature: domain Description: Hemerythrin Location: 6365-67 16 bp Feature: gene Location: 6812-7207 bp Feature: gene Location: 7887-9138 bp Ori: PII01061.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8127-8742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8127 -87 42 bp Feature: domain Description: GIIM Note: maturase Location: 8787-8997 bp Feature: domain Description: GIIM Note: maturase Location: 87 87 -8997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Hemerythrin (TIGR00058), RVT-GII, GIIM (pfam08388)

Seq: PEJL01000210.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 MaSuRCA_398_len:49254, whole genome shotgun sequence (49254 bp)
Overview 1 RT 1: 1-6911 bp Neighborhood of RT #1 [1, 7000] COG3666 DDE_Tnp_1_6 RVT-Retrons ComA-like_MBL-fold trans_reg_C Feature: gene Location: 1-577 bp Feature: gene Location: 617-1801 bp Feature: domain Description: COG3666 Location: 659-1100 bp Feature: domain Description: COG3666 Location: 659-1100 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1577-1784 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1577-178 4 bp Feature: gene Location: 2299-4008 bp Ori: PIH94143.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2452-3049 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2452-3049 bp Feature: gene Location: 4452-5870 bp Ori: PIH94144.1 Feature: domain Description: ComA-like_MBL-fold Location: 5001-5487 bp Feature: domain Description: ComA-like_MBL-fold Location: 5001-548 7 bp Feature: gene Location: 6677-7000 bp Ori: PIH94145.1 Feature: domain Description: trans_reg_C Location: 6701-6911 bp Feature: domain Description: trans_reg_C Location: 6701-6911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751), RVT-Retrons, ComA-like_MBL-fold (cd07731), trans_reg_C (cd00383)

Seq: PEJL01000165.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 ABySS_191_len:32860, whole genome shotgun sequence (32860 bp)
Overview 1 RT 1: 1-2452 bp Neighborhood of RT #1 [1, 2452] RVT-GII GIIM Feature: gene Location: 1-211 bp Feature: gene Location: 208-1476 bp Ori: PIH96346.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412-1069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412-1069 bp Feature: domain Description: GIIM Note: maturase Location: 1147-1369 bp Feature: domain Description: GIIM Note: maturase Location: 1147-1369 bp Feature: gene Location: 1531-1677 bp Feature: gene Location: 1736-2452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PEJL01000071.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 PERGA_13_len:28974, whole genome shotgun sequence (28974 bp)
Overview 1 RT 1: 90-1920 bp Neighborhood of RT #1 [90, 1920] RVT-GII GIIM Feature: gene Location: 90-1457 bp Ori: PIH99894.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423-1038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423-10 38 bp Feature: domain Description: GIIM Note: maturase Location: 1095-1323 bp Feature: domain Description: GIIM Note: maturase Location: 10 95-1323 bp Feature: gene Location: 1459-1739 bp Feature: gene Location: 1837-1920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PEJL01000196.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 MaSuRCA_584_len:4459, whole genome shotgun sequence (4459 bp)
Overview 1 RT 1: 3003-4459 bp Neighborhood of RT #1 [3003, 4459] IstB_IS21 RVT-GII Feature: gene Location: 3003-3116 bp Feature: gene Location: 3108-3449 bp Ori: PIH94711.1 Feature: domain Description: IstB_IS21 Location: 3114-3381 bp Feature: domain Description: IstB_IS21 Location: 311 4-3381 bp Feature: gene Location: 3448-3653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3472-3640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3472-3640 bp Feature: gene Location: 4038-4459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21 (pfam01695), RVT-GII

Seq: PEJL01000138.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 ABySS_347_len:46813, whole genome shotgun sequence (46813 bp)
Overview 1 RT 1: 1-2518 bp Neighborhood of RT #1 [1, 2547] RVT-GII GIIM PAAR_motif Feature: gene Location: 1-82 bp Feature: gene Location: 489-1757 bp Ori: PIH97844.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 693-1350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 693-1350 bp Feature: domain Description: GIIM Note: maturase Location: 1428-1650 bp Feature: domain Description: GIIM Note: maturase Location: 1428-1650 bp Feature: gene Location: 1800-2282 bp Feature: gene Location: 2293-2547 bp Ori: PIH97846.1 Feature: domain Description: PAAR_motif Location: 2317-2518 bp Feature: domain Description: PAAR_motif Location: 2317-2518 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PAAR_motif (pfam05488)

Seq: PEJL01000177.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 MaSuRCA_640_len:86911, whole genome shotgun sequence (86911 bp)
Overview 1 RT 1: 83603-86770 bp Neighborhood of RT #1 [83603, 86911] YdhU TAT_signal bact_SO_family_Moco RVT-GII GIIM Feature: gene Location: 83603-84223 bp Ori: PIH95867.1 Feature: domain Description: YdhU Location: 83621-84176 bp Feature: domain Description: YdhU Location: 83621-84176 bp Feature: gene Location: 84220-84990 bp Ori: PIH95868.1 Feature: domain Description: TAT_signal Location: 84295-84358 bp Feature: domain Description: TAT_signal Location: 84295-84358 bp Feature: domain Description: bact_SO_family_Moco Location: 84454-84982 bp Feature: domain Description: bact_SO_family_Moco Location: 84454-84982 bp Feature: gene Location: 85660-86911 bp Ori: PIH95869.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85900-86515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85900-86515 bp Feature: domain Description: GIIM Note: maturase Location: 86560-86770 bp Feature: domain Description: GIIM Note: maturase Location: 86560-86770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdhU (COG4117), TAT_signal (pfam10518), bact_SO_family_Moco (cd02108), RVT-GII, GIIM (pfam08388)

Seq: PEJL01000003.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 ABySS_340_len:21563, whole genome shotgun sequence (21563 bp)
Overview 1 RT 1: 1-3442 bp Neighborhood of RT #1 [1, 3447] RVT-GII GIIM PRK13968 Feature: gene Location: 1-1252 bp Ori: PII01375.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: domain Description: GIIM Note: maturase Location: 901-1111 bp Feature: domain Description: GIIM Note: maturase Location: 901-1111 bp Feature: gene Location: 1700-1987 bp Feature: gene Location: 2056-3447 bp Ori: PII01376.1 Feature: domain Description: PRK13968 Location: 2065-3442 bp Feature: domain Description: PRK13968 Location: 2065-3442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK13968 (putative succinate semialdehyde dehydrogenase; Provisional)

Seq: PEJL01000113.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 ABySS_185_len:12230, whole genome shotgun sequence (12230 bp)
Overview 1 RT 1: 7269-12089 bp Neighborhood of RT #1 [7269, 12230] PRK08186 urea_carbox RVT-GII GIIM Feature: gene Location: 7269-9083 bp Ori: PIH98896.1 Gene: atzF Feature: domain Description: PRK08186 Location: 7293-9078 bp Feature: domain Description: PRK08186 Location: 7293-9078 bp Feature: gene Location: 9119-10522 bp Ori: PIH98898.1 Feature: domain Description: urea_carbox Location: 9275-10511 bp Feature: domain Description: urea_carbox Location: 9275-10511 bp Feature: gene Location: 10979-12230 bp Ori: PIH98897.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11219-11834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11219-11834 bp Feature: domain Description: GIIM Note: maturase Location: 11879-12089 bp Feature: domain Description: GIIM Note: maturase Location: 11879-12089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08186 (allophanate hydrolase; Provisional), urea_carbox (TIGR02712), RVT-GII, GIIM (pfam08388)

Seq: PEJL01000016.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 ABySS_274_len:42035, whole genome shotgun sequence (42035 bp)
Overview 1 RT 1: 36913-41358 bp Neighborhood of RT #1 [36913, 41531] urea_degr_1 urea_carbox RVT-GII GIIM Feature: gene Location: 36913-37530 bp Ori: PII01119.1 Feature: domain Description: urea_degr_1 Location: 36940-37522 bp Feature: domain Description: urea_degr_1 Location: 36940-37522 bp Feature: gene Location: 37640-40135 bp Feature: domain Description: urea_carbox Location: 37646-39941 bp Feature: domain Description: urea_carbox Location: 37646-39941 bp Feature: gene Location: 40248-41531 bp Ori: PII01120.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40488-41103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40488-41103 bp Feature: domain Description: GIIM Note: maturase Location: 41148-41358 bp Feature: domain Description: GIIM Note: maturase Location: 41148-41358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT urea_degr_1 (TIGR03424), urea_carbox (TIGR02712), RVT-GII, GIIM (pfam08388)

Seq: PEJL01000068.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 ABySS_309_len:64634, whole genome shotgun sequence (64634 bp)
Overview 1 RT 1: 51534-64493 bp Neighborhood of RT #1 [51534, 64634] PRK12467 PRK12467 A_NRPS PRK12467 FhuE RVT-GII GIIM Feature: gene Location: 51534-60155 bp Ori: PIH99978.1 Feature: domain Description: PRK12467 Location: 51537-54369 bp Feature: domain Description: PRK12467 Location: 51537-54369 bp Feature: domain Description: PRK12467 Location: 54384-57471 bp Feature: domain Description: PRK12467 Location: 54384-57471 bp Feature: domain Description: A_NRPS Location: 57555-58995 bp Feature: domain Description: A_NRPS Location: 57555-58995 bp Feature: domain Description: PRK12467 Location: 59064-59898 bp Feature: domain Description: PRK12467 Location: 59064-59898 bp Feature: gene Location: 60292-62697 bp Ori: PIH99979.1 Feature: domain Description: FhuE Location: 60583-62695 bp Feature: domain Description: FhuE Location: 60583-62695 bp Feature: gene Location: 63383-64634 bp Ori: PIH99980.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63623-64238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63623-64238 bp Feature: domain Description: GIIM Note: maturase Location: 64283-64493 bp Feature: domain Description: GIIM Note: maturase Location: 64283-64493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12467 (peptide synthase; Provisional), A_NRPS (cd05930), FhuE (COG4773), RVT-GII, GIIM (pfam08388)

Seq: PEJL01000070.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 MaSuRCA_648_len:38338, whole genome shotgun sequence (38338 bp)
Overview 1 RT 1: 1617-7580 bp Neighborhood of RT #1 [1617, 7588] DUF2625 RVT-GII Intron_maturas2 HNHc Top1 modC_ABC Feature: gene Location: 1617-2252 bp Ori: PIH99923.1 Feature: domain Description: DUF2625 Location: 1629-2217 bp Feature: domain Description: DUF2625 Location: 1629-2217 bp Feature: gene Location: 2259-2450 bp Feature: gene Location: 2690-4525 bp Ori: PIH99925.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2951-3764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2951-3764 bp Feature: domain Description: Intron_maturas2 Location: 3860-4175 bp Feature: domain Description: Intron_maturas2 Location: 3860-4175 bp Feature: domain Description: HNHc Note: nucleases Location: 4298-4463 bp Feature: domain Description: HNHc Note: nucleases Location: 4298-4463 bp Feature: gene Location: 5356-6411 bp Ori: PIH99926.1 Feature: domain Description: Top1 Location: 5389-6403 bp Feature: domain Description: Top1 Location: 5389-6403 bp Feature: gene Location: 6500-7588 bp Ori: PIH99927.1 Gene: modC Feature: domain Description: modC_ABC Location: 6515-7580 bp Feature: domain Description: modC_ABC Location: 6515-7580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2625 (pfam10946), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Top1 (COG3569), modC_ABC (TIGR02142)

Seq: PEJL01000170.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 PERGA_25_len:55959, whole genome shotgun sequence (55959 bp)
Overview 1 RT 1: 505-5389 bp Neighborhood of RT #1 [505, 5409] RVT-GII GIIM PRK00058 GAF PAS PRK10060 Feature: gene Location: 505-1788 bp Ori: PIH96105.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1615 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1615 bp Feature: gene Location: 1922-2569 bp Ori: PIH96106.1 Feature: domain Description: PRK00058 Location: 1943-2564 bp Feature: domain Description: PRK00058 Location: 19 43-2564 bp Feature: gene Location: 2716-5409 bp Ori: PIH96107.1 Feature: domain Description: GAF Location: 3295-3709 bp Feature: domain Description: GAF Location: 3295-3709 bp Feature: domain Description: PAS Location: 3754-3925 bp Feature: domain Description: PAS Location: 3754-3925 bp Feature: domain Description: PRK10060 Location: 4060-5389 bp Feature: domain Description: PRK10060 Location: 4060-5389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK00058 (peptide-methionine (S)-S-oxide reductase MsrA), GAF (smart00065), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase)

Seq: PEJL01000057.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 ABySS_206_len:7055, whole genome shotgun sequence (7055 bp)
Overview 1 RT 1: 4023-6914 bp Neighborhood of RT #1 [4023, 7055] RlmJ RVT-GII GIIM Feature: gene Location: 4023-4283 bp Feature: gene Location: 4282-5118 bp Ori: PII00295.1 Feature: domain Description: RlmJ Location: 4285-5113 bp Feature: domain Description: RlmJ Location: 4285-5113 bp Feature: gene Location: 5804-7055 bp Ori: PII00296.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6044-6659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6044-6659 bp Feature: domain Description: GIIM Note: maturase Location: 6704-6914 bp Feature: domain Description: GIIM Note: maturase Location: 6704-6914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RlmJ (COG2961), RVT-GII, GIIM (pfam08388)

Seq: PEJL01000122.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 ABySS_291_len:67189, whole genome shotgun sequence (67189 bp)
Overview 1 RT 1: 64582-67048 bp Neighborhood of RT #1 [64582, 67189] LbH_gamma_CA_like YdhL RVT-GII GIIM Feature: gene Location: 64582-65106 bp Ori: PIH98763.1 Feature: domain Description: LbH_gamma_CA_like Location: 64618-65068 bp Feature: domain Description: LbH_gamma_CA_like Location: 64618-65068 bp Feature: gene Location: 65106-65324 bp Ori: PIH98764.1 Feature: domain Description: YdhL Location: 65133-65289 bp Feature: domain Description: YdhL Location: 65133-65289 bp Feature: gene Location: 65938-67189 bp Ori: PIH98765.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66178-66793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66178-66793 bp Feature: domain Description: GIIM Note: maturase Location: 66838-67048 bp Feature: domain Description: GIIM Note: maturase Location: 66838-67048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LbH_gamma_CA_like (cd04645), YdhL (COG3313), RVT-GII, GIIM (pfam08388)

Seq: PEJL01000039.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 SPAdes_4_len:122469, whole genome shotgun sequence (122469 bp)
Overview 1 RT 1: 119540-122328 bp Neighborhood of RT #1 [119540, 122469] SsuD RVT-GII GIIM Feature: gene Location: 119540-120577 bp Ori: PII00595.1 Feature: domain Description: SsuD Location: 119597-120536 bp Feature: domain Description: SsuD Location: 119597-120536 bp Feature: gene Location: 120537-120716 bp Feature: gene Location: 121218-122469 bp Ori: PII00597.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121458-122073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121458-122 073 bp Feature: domain Description: GIIM Note: maturase Location: 122118-122328 bp Feature: domain Description: GIIM Note: maturase Location: 122 118-122 328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SsuD (COG2141), RVT-GII, GIIM (pfam08388)

Seq: PEJL01000064.1 Pseudomonas syringae pv. actinidiae strain Psa 105743 ABySS_432_len:37525, whole genome shotgun sequence (37525 bp)
Overview 1 RT 1: 35413-37384 bp Neighborhood of RT #1 [35413, 37525] ArfA RVT-GII GIIM Feature: gene Location: 35413-35568 bp Ori: PII00164.1 Feature: domain Description: ArfA Location: 35425-35551 bp Feature: domain Description: ArfA Location: 35425-35551 bp Feature: gene Location: 35584-35826 bp Feature: gene Location: 36274-37525 bp Ori: PII00166.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36514-37129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36514-37129 bp Feature: domain Description: GIIM Note: maturase Location: 37174-37384 bp Feature: domain Description: GIIM Note: maturase Location: 37174-37384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArfA (COG3036), RVT-GII, GIIM (pfam08388)