myRT

myRT report for GCA_002750525.1_ASM275052v1

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Seq: PEJM01000013.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 A5-MiSeq_4_len:124162, whole genome shotgun sequence (124162 bp)
Overview 1 RT 1: 505-3400 bp 2 RT 2: 121287-124021 bp Neighborhood of RT #1 [505, 3441] RVT-GII GIIM RutF GT_2_like_f Neighborhood of RT #2 [121287, 124162] SsuD RVT-GII GIIM Feature: gene Location: 505-1788 bp Ori: PIH83646.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1 360 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1615 bp Feature: domain Description: GIIM Note: maturase Location: 1 405-1 61 5 bp Feature: gene Location: 2090-2674 bp Ori: PIH83647.1 Feature: domain Description: RutF Location: 2123-2636 bp Feature: domain Description: RutF Location: 21 23-2636 bp Feature: gene Location: 2848-3441 bp Ori: PIH83734.1 Feature: domain Description: GT_2_like_f Location: 2854-3400 bp Feature: domain Description: GT_2_like_f Location: 2854-3400 bp Feature: gene Location: 121287-122324 bp Ori: PIH83731.1 Feature: domain Description: SsuD Location: 121344-122283 bp Feature: domain Description: SsuD Location: 1 21 344-1 22283 bp Feature: gene Location: 122284-122463 bp Feature: gene Location: 122911-124162 bp Ori: PIH83733.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123151-123766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 231 51 -1 23766 bp Feature: domain Description: GIIM Note: maturase Location: 123811-124021 bp Feature: domain Description: GIIM Note: maturase Location: 1 2381 1 -1 24021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RutF (TIGR03615), GT_2_like_f (cd04182), SsuD (COG2141)

Seq: PEJM01000172.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 MaSuRCA_472_len:46535, whole genome shotgun sequence (46535 bp)
Overview 1 RT 1: 44270-46221 bp Neighborhood of RT #1 [44270, 46328] PAAR_motif RVT-GII GIIM Feature: gene Location: 44270-44524 bp Ori: PIH80260.1 Feature: domain Description: PAAR_motif Location: 44294-44495 bp Feature: domain Description: PAAR_motif Location: 442 94-44495 bp Feature: gene Location: 44535-45017 bp Feature: gene Location: 45060-46328 bp Ori: PIH80262.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45264-45921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452 64-4592 1 bp Feature: domain Description: GIIM Note: maturase Location: 45999-46221 bp Feature: domain Description: GIIM Note: maturase Location: 45999-462 2 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAAR_motif (pfam05488), RVT-GII, GIIM (pfam08388)

Seq: PEJM01000098.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 MaSuRCA_469_len:38404, whole genome shotgun sequence (38404 bp)
Overview 1 RT 1: 1560-7523 bp Neighborhood of RT #1 [1560, 7531] DUF2625 RVT-GII Intron_maturas2 HNHc Top1 modC_ABC Feature: gene Location: 1560-2195 bp Ori: PIH81816.1 Feature: domain Description: DUF2625 Location: 1572-2160 bp Feature: domain Description: DUF2625 Location: 1572-2160 bp Feature: gene Location: 2202-2393 bp Feature: gene Location: 2633-4468 bp Ori: PIH81818.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2894-3707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2894-3 707 bp Feature: domain Description: Intron_maturas2 Location: 3803-4118 bp Feature: domain Description: Intron_maturas2 Location: 3 803 -4118 bp Feature: domain Description: HNHc Note: nucleases Location: 4241-4406 bp Feature: domain Description: HNHc Note: nucleases Location: 4241-4406 bp Feature: gene Location: 5299-6354 bp Ori: PIH81819.1 Feature: domain Description: Top1 Location: 5332-6346 bp Feature: domain Description: Top1 Location: 53 3 2-63 46 bp Feature: gene Location: 6443-7531 bp Ori: PIH81820.1 Gene: modC Feature: domain Description: modC_ABC Location: 6458-7523 bp Feature: domain Description: modC_ABC Location: 6458-7523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2625 (pfam10946), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Top1 (COG3569), modC_ABC (TIGR02142)

Seq: PEJM01000114.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 ABySS_286_len:6287, whole genome shotgun sequence (6287 bp)
Overview 1 RT 1: 1-3626 bp Neighborhood of RT #1 [1, 3626] HTH_28 RVT-UG9 UvrD_C Feature: gene Location: 1-403 bp Ori: PIH81373.1 Feature: domain Description: HTH_28 Location: 94-247 bp Feature: domain Description: HTH_28 Location: 94 -24 7 bp Feature: gene Location: 494-1633 bp Ori: PIH81374.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 497-881 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 4 97-881 bp Feature: gene Location: 1731-2321 bp Ori: PIH81375.1 Feature: domain Description: UvrD_C Location: 2055-2250 bp Feature: domain Description: UvrD_C Location: 2055-2250 bp Feature: gene Location: 2682-3626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_28 (pfam13518), RVT-UG9, UvrD_C (pfam13361)

Seq: PEJM01000147.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 ABySS_205_len:48623, whole genome shotgun sequence (48623 bp)
Overview 1 RT 1: 44481-47946 bp Neighborhood of RT #1 [44481, 48119] tat_substr_1 PRK10378 RVT-GII GIIM Feature: gene Location: 44481-45803 bp Ori: PIH80875.1 Feature: domain Description: tat_substr_1 Location: 44514-45774 bp Feature: domain Description: tat_substr_1 Location: 445 14-45 774 bp Feature: gene Location: 45833-46657 bp Ori: PIH80876.1 Feature: domain Description: PRK10378 Location: 45905-46655 bp Feature: domain Description: PRK10378 Location: 45 905 -4665 5 bp Feature: gene Location: 46836-48119 bp Ori: PIH80877.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47076-47691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47076-47691 bp Feature: domain Description: GIIM Note: maturase Location: 47736-47946 bp Feature: domain Description: GIIM Note: maturase Location: 47736-47946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tat_substr_1 (TIGR01412), PRK10378 (inactive ferrous ion transporter periplasmic protein EfeO; Provisional), RVT-GII, GIIM (pfam08388)

Seq: PEJM01000206.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 ABySS_238_len:140047, whole genome shotgun sequence (140047 bp)
Overview 1 RT 1: 137510-139370 bp Neighborhood of RT #1 [137510, 139543] YhhQ RVT-GII GIIM Feature: gene Location: 137510-137977 bp Ori: PIH79276.1 Feature: domain Description: YhhQ Location: 137585-137900 bp Feature: domain Description: YhhQ Location: 137585-137900 bp Feature: gene Location: 137976-138191 bp Feature: gene Location: 138260-139543 bp Ori: PIH79278.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138500-139115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138500-139115 bp Feature: domain Description: GIIM Note: maturase Location: 139160-139370 bp Feature: domain Description: GIIM Note: maturase Location: 13916 0-139370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhQ (COG1738), RVT-GII, GIIM (pfam08388)

Seq: PEJM01000235.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 MaSuRCA_559_len:4516, whole genome shotgun sequence (4516 bp)
Overview 1 RT 1: 2979-4516 bp Neighborhood of RT #1 [2979, 4516] IstB_IS21 RVT-GII Feature: gene Location: 2979-3092 bp Feature: gene Location: 3084-3425 bp Ori: PIH78449.1 Feature: domain Description: IstB_IS21 Location: 3090-3357 bp Feature: domain Description: IstB_IS21 Location: 3090-3357 bp Feature: gene Location: 3424-3629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3448-3616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3448-3616 bp Feature: gene Location: 4014-4516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21 (pfam01695), RVT-GII

Seq: PEJM01000044.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 ABySS_227_len:7014, whole genome shotgun sequence (7014 bp)
Overview 1 RT 1: 3982-6873 bp Neighborhood of RT #1 [3982, 7014] RlmJ RVT-GII GIIM Feature: gene Location: 3982-4242 bp Feature: gene Location: 4241-5077 bp Ori: PIH83218.1 Feature: domain Description: RlmJ Location: 4244-5072 bp Feature: domain Description: RlmJ Location: 4244-5072 bp Feature: gene Location: 5763-7014 bp Ori: PIH83219.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6003-6618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6003-6618 bp Feature: domain Description: GIIM Note: maturase Location: 6663-6873 bp Feature: domain Description: GIIM Note: maturase Location: 6663-68 73 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RlmJ (COG2961), RVT-GII, GIIM (pfam08388)

Seq: PEJM01000205.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 ABySS_196_len:18240, whole genome shotgun sequence (18240 bp)
Overview 1 RT 1: 13834-18099 bp Neighborhood of RT #1 [13834, 18240] GabT GDH_like_2 RVT-GII GIIM Feature: gene Location: 13834-15138 bp Ori: PIH79298.1 Gene: gabT Feature: domain Description: GabT Location: 13861-15124 bp Feature: domain Description: GabT Location: 13861-15124 bp Feature: gene Location: 15387-16352 bp Ori: PIH79301.1 Feature: domain Description: GDH_like_2 Location: 15435-16341 bp Feature: domain Description: GDH_like_2 Location: 15435-16341 bp Feature: gene Location: 16989-18240 bp Ori: PIH79299.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17229-17844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17229 -17844 bp Feature: domain Description: GIIM Note: maturase Location: 17889-18099 bp Feature: domain Description: GIIM Note: maturase Location: 17889 -1809 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GabT (COG0160), GDH_like_2 (cd12164), RVT-GII, GIIM (pfam08388)

Seq: PEJM01000117.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 PERGA_4_len:17986, whole genome shotgun sequence (17986 bp)
Overview 1 RT 1: 90-1974 bp Neighborhood of RT #1 [90, 1974] RVT-GII GIIM Feature: gene Location: 90-1457 bp Ori: PIH81358.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423-1038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423-10 38 bp Feature: domain Description: GIIM Note: maturase Location: 1095-1323 bp Feature: domain Description: GIIM Note: maturase Location: 10 95-1323 bp Feature: gene Location: 1505-1834 bp Feature: gene Location: 1774-1974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PEJM01000061.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 PERGA_35_len:86911, whole genome shotgun sequence (86911 bp)
Overview 1 RT 1: 1-3262 bp Neighborhood of RT #1 [1, 3309] RVT-GII GIIM TAT_signal bact_SO_family_Moco YdhU Feature: gene Location: 1-1252 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: domain Description: GIIM Note: maturase Location: 901-1111 bp Feature: domain Description: GIIM Note: maturase Location: 901-11 11 bp Feature: gene Location: 1922-2692 bp Ori: PIH82598.1 Feature: domain Description: TAT_signal Location: 1997-2060 bp Feature: domain Description: TAT_signal Location: 1997-2060 bp Feature: domain Description: bact_SO_family_Moco Location: 2156-2684 bp Feature: domain Description: bact_SO_family_Moco Location: 2156-2684 bp Feature: gene Location: 2689-3309 bp Ori: PIH82599.1 Feature: domain Description: YdhU Location: 2707-3262 bp Feature: domain Description: YdhU Location: 2707-3262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TAT_signal (pfam10518), bact_SO_family_Moco (cd02108), YdhU (COG4117)

Seq: PEJM01000219.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 ABySS_273_len:33229, whole genome shotgun sequence (33229 bp)
Overview 1 RT 1: 30497-33229 bp Neighborhood of RT #1 [30497, 33229] RVT-GII GIIM Feature: gene Location: 30497-31213 bp Feature: gene Location: 31272-31418 bp Feature: gene Location: 31473-32741 bp Ori: PIH78777.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31677-32334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31677-32334 bp Feature: domain Description: GIIM Note: maturase Location: 32412-32634 bp Feature: domain Description: GIIM Note: maturase Location: 32412 -32634 bp Feature: gene Location: 33148-33229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PEJM01000056.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 PERGA_45_len:64600, whole genome shotgun sequence (64600 bp)
Overview 1 RT 1: 51501-64459 bp Neighborhood of RT #1 [51501, 64600] PRK12467 PRK12467 A_NRPS PRK12467 FhuE RVT-GII GIIM Feature: gene Location: 51501-60122 bp Ori: PIH82962.1 Feature: domain Description: PRK12467 Location: 51504-54336 bp Feature: domain Description: PRK12467 Location: 51504-54336 bp Feature: domain Description: PRK12467 Location: 54351-57438 bp Feature: domain Description: PRK12467 Location: 54351-57438 bp Feature: domain Description: A_NRPS Location: 57522-58962 bp Feature: domain Description: A_NRPS Location: 57522-58962 bp Feature: domain Description: PRK12467 Location: 59031-59865 bp Feature: domain Description: PRK12467 Location: 59031-59865 bp Feature: gene Location: 60259-62664 bp Ori: PIH82963.1 Feature: domain Description: FhuE Location: 60550-62662 bp Feature: domain Description: FhuE Location: 60550-62662 bp Feature: gene Location: 63349-64600 bp Ori: PIH82964.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63589-64204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63589-64204 bp Feature: domain Description: GIIM Note: maturase Location: 64249-64459 bp Feature: domain Description: GIIM Note: maturase Location: 64249-64459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12467 (peptide synthase; Provisional), A_NRPS (cd05930), FhuE (COG4773), RVT-GII, GIIM (pfam08388)

Seq: PEJM01000109.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 ABySS_373_len:21568, whole genome shotgun sequence (21568 bp)
Overview 1 RT 1: 1-3442 bp Neighborhood of RT #1 [1, 3447] RVT-GII GIIM PRK13968 Feature: gene Location: 1-1252 bp Ori: PIH81535.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: domain Description: GIIM Note: maturase Location: 901-1111 bp Feature: domain Description: GIIM Note: maturase Location: 901-1111 bp Feature: gene Location: 1700-1987 bp Feature: gene Location: 2056-3447 bp Ori: PIH81536.1 Feature: domain Description: PRK13968 Location: 2065-3442 bp Feature: domain Description: PRK13968 Location: 2065-3442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK13968 (putative succinate semialdehyde dehydrogenase; Provisional)

Seq: PEJM01000168.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 ABySS_376_len:18559, whole genome shotgun sequence (18559 bp)
Overview 1 RT 1: 505-3796 bp Neighborhood of RT #1 [505, 3801] RVT-GII GIIM PBP2_Mlr3796_like HisM Feature: gene Location: 505-1788 bp Ori: PIH80291.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1615 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1615 bp Feature: gene Location: 2224-3075 bp Ori: PIH80292.1 Feature: domain Description: PBP2_Mlr3796_like Location: 2323-3016 bp Feature: domain Description: PBP2_Mlr3796_like Location: 2323-3016 bp Feature: gene Location: 3139-3801 bp Ori: PIH80293.1 Feature: domain Description: HisM Location: 3166-3796 bp Feature: domain Description: HisM Location: 3166-3796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PBP2_Mlr3796_like (cd13695), HisM (COG0765)

Seq: PEJM01000166.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 ABySS_372_len:12079, whole genome shotgun sequence (12079 bp)
Overview 1 RT 1: 1-4957 bp Neighborhood of RT #1 [1, 4962] RVT-GII GIIM urea_carbox PRK08186 Feature: gene Location: 1-1252 bp Ori: PIH80312.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: domain Description: GIIM Note: maturase Location: 901-1111 bp Feature: domain Description: GIIM Note: maturase Location: 901-1111 bp Feature: gene Location: 1709-3112 bp Ori: PIH80319.1 Feature: domain Description: urea_carbox Location: 1865-3101 bp Feature: domain Description: urea_carbox Location: 1865-3101 bp Feature: gene Location: 3148-4962 bp Ori: PIH80313.1 Gene: atzF Feature: domain Description: PRK08186 Location: 3172-4957 bp Feature: domain Description: PRK08186 Location: 3172-4957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), urea_carbox (TIGR02712), PRK08186 (allophanate hydrolase; Provisional)

Seq: PEJM01000171.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 PERGA_43_len:21338, whole genome shotgun sequence (21338 bp)
Overview 1 RT 1: 539-2381 bp Neighborhood of RT #1 [539, 2381] RVT-GII GIIM DDE_Tnp_1_6 Feature: gene Location: 539-1807 bp Ori: PIH80265.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743-1400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743-1400 bp Feature: domain Description: GIIM Note: maturase Location: 1478-1700 bp Feature: domain Description: GIIM Note: maturase Location: 1478-17 00 bp Feature: gene Location: 1862-2113 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1889-2066 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1889-2066 bp Feature: gene Location: 2163-2381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1_6 (pfam13751)

Seq: PEJM01000092.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 PERGA_52_len:55932, whole genome shotgun sequence (55932 bp)
Overview 1 RT 1: 505-5389 bp Neighborhood of RT #1 [505, 5409] RVT-GII GIIM PRK00058 GAF PAS PRK10060 Feature: gene Location: 505-1788 bp Ori: PIH81917.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1615 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1615 bp Feature: gene Location: 1922-2569 bp Ori: PIH81918.1 Feature: domain Description: PRK00058 Location: 1943-2564 bp Feature: domain Description: PRK00058 Location: 1943-2564 bp Feature: gene Location: 2716-5409 bp Ori: PIH81919.1 Feature: domain Description: GAF Location: 3295-3709 bp Feature: domain Description: GAF Location: 3295-3709 bp Feature: domain Description: PAS Location: 3754-3925 bp Feature: domain Description: PAS Location: 3754-3925 bp Feature: domain Description: PRK10060 Location: 4060-5389 bp Feature: domain Description: PRK10060 Location: 4060-5389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK00058 (peptide-methionine (S)-S-oxide reductase MsrA), GAF (smart00065), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase)

Seq: PEJM01000104.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 ABySS_231_len:42291, whole genome shotgun sequence (42291 bp)
Overview 1 RT 1: 37169-41614 bp Neighborhood of RT #1 [37169, 41787] urea_degr_1 urea_carbox RVT-GII GIIM Feature: gene Location: 37169-37786 bp Ori: PIH81639.1 Feature: domain Description: urea_degr_1 Location: 37196-37778 bp Feature: domain Description: urea_degr_1 Location: 3719 6-37778 bp Feature: gene Location: 37896-40391 bp Feature: domain Description: urea_carbox Location: 37902-40197 bp Feature: domain Description: urea_carbox Location: 37902-4019 7 bp Feature: gene Location: 40504-41787 bp Ori: PIH81640.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40744-41359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40744-41359 bp Feature: domain Description: GIIM Note: maturase Location: 41404-41614 bp Feature: domain Description: GIIM Note: maturase Location: 41404-41614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT urea_degr_1 (TIGR03424), urea_carbox (TIGR02712), RVT-GII, GIIM (pfam08388)

Seq: PEJM01000223.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 ABySS_375_len:20828, whole genome shotgun sequence (20828 bp)
Overview 1 RT 1: 505-3967 bp Neighborhood of RT #1 [505, 3993] RVT-GII GIIM nadE PRK05321 Feature: gene Location: 505-1788 bp Ori: PIH78668.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1360 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1615 bp Feature: domain Description: GIIM Note: maturase Location: 1405-1615 bp Feature: gene Location: 1916-2743 bp Ori: PIH78669.1 Gene: nadE Feature: domain Description: nadE Location: 1928-2738 bp Feature: domain Description: nadE Location: 1928-2738 bp Feature: gene Location: 2770-3993 bp Ori: PIH78670.1 Gene: pncB Feature: domain Description: PRK05321 Location: 2788-3967 bp Feature: domain Description: PRK05321 Location: 2788-3967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), nadE (TIGR00552), PRK05321 (nicotinate phosphoribosyltransferase; Provisional)

Seq: PEJM01000178.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 ABySS_374_len:37297, whole genome shotgun sequence (37297 bp)
Overview 1 RT 1: 1-2096 bp Neighborhood of RT #1 [1, 2113] RVT-GII GIIM ArfA Feature: gene Location: 1-1252 bp Ori: PIH80055.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: domain Description: GIIM Note: maturase Location: 901-1111 bp Feature: domain Description: GIIM Note: maturase Location: 901-1111 bp Feature: gene Location: 1700-1942 bp Feature: gene Location: 1958-2113 bp Ori: PIH80057.1 Feature: domain Description: ArfA Location: 1970-2096 bp Feature: domain Description: ArfA Location: 1970-2096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ArfA (COG3036)

Seq: PEJM01000122.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 ABySS_371_len:8809, whole genome shotgun sequence (8809 bp)
Overview 1 RT 1: 1-2739 bp Neighborhood of RT #1 [1, 2822] RVT-GII GIIM Hemerythrin Feature: gene Location: 1-1252 bp Ori: PIH81312.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: domain Description: GIIM Note: maturase Location: 901-1111 bp Feature: domain Description: GIIM Note: maturase Location: 901-1111 bp Feature: gene Location: 1932-2327 bp Feature: gene Location: 2340-2822 bp Ori: PIH81314.1 Feature: domain Description: Hemerythrin Location: 2388-2739 bp Feature: domain Description: Hemerythrin Location: 2388-2739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Hemerythrin (TIGR00058)

Seq: PEJM01000155.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 ABySS_344_len:67278, whole genome shotgun sequence (67278 bp)
Overview 1 RT 1: 64671-67137 bp Neighborhood of RT #1 [64671, 67278] LbH_gamma_CA_like YdhL RVT-GII GIIM Feature: gene Location: 64671-65195 bp Ori: PIH80708.1 Feature: domain Description: LbH_gamma_CA_like Location: 64707-65157 bp Feature: domain Description: LbH_gamma_CA_like Location: 64707-65157 bp Feature: gene Location: 65195-65413 bp Ori: PIH80709.1 Feature: domain Description: YdhL Location: 65222-65378 bp Feature: domain Description: YdhL Location: 65222-65378 bp Feature: gene Location: 66027-67278 bp Ori: PIH80710.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66267-66882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66267-66882 bp Feature: domain Description: GIIM Note: maturase Location: 66927-67137 bp Feature: domain Description: GIIM Note: maturase Location: 66927-67137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LbH_gamma_CA_like (cd04645), YdhL (COG3313), RVT-GII, GIIM (pfam08388)

Seq: PEJM01000047.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 MaSuRCA_463_len:49249, whole genome shotgun sequence (49249 bp)
Overview 1 RT 1: 42362-49100 bp Neighborhood of RT #1 [42362, 49249] trans_reg_C ComA-like_MBL-fold RVT-Retrons COG3666 DDE_Tnp_1_6 Tra5 Feature: gene Location: 42362-42685 bp Ori: PIH83196.1 Feature: domain Description: trans_reg_C Location: 42386-42596 bp Feature: domain Description: trans_reg_C Location: 42386-42596 bp Feature: gene Location: 43492-44910 bp Ori: PIH83197.1 Feature: domain Description: ComA-like_MBL-fold Location: 44041-44527 bp Feature: domain Description: ComA-like_MBL-fold Location: 44041-44527 bp Feature: gene Location: 45354-47063 bp Ori: PIH83198.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45507-46104 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45507-46104 bp Feature: gene Location: 47561-48745 bp Feature: domain Description: COG3666 Location: 47603-48044 bp Feature: domain Description: COG3666 Location: 47603-48044 bp Feature: domain Description: DDE_Tnp_1_6 Location: 48521-48728 bp Feature: domain Description: DDE_Tnp_1_6 Location: 48521-48728 bp Feature: gene Location: 48785-49249 bp Ori: PIH83201.1 Feature: domain Description: Tra5 Location: 48800-49100 bp Feature: domain Description: Tra5 Location: 48800-49100 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trans_reg_C (cd00383), ComA-like_MBL-fold (cd07731), RVT-Retrons, COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751), Tra5 (COG2801)

Seq: PEJM01000063.1 Pseudomonas syringae pv. actinidiae strain Psa 127771 ABySS_315_len:23922, whole genome shotgun sequence (23922 bp)
Overview 1 RT 1: 19453-23245 bp Neighborhood of RT #1 [19453, 23418] FhuE RVT-GII GIIM Feature: gene Location: 19453-19761 bp Feature: gene Location: 19760-21991 bp Ori: PIH82561.1 Feature: domain Description: FhuE Location: 19838-21989 bp Feature: domain Description: FhuE Location: 19838-21989 bp Feature: gene Location: 22135-23418 bp Ori: PIH82562.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22375-22990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22375-22990 bp Feature: domain Description: GIIM Note: maturase Location: 23035-23245 bp Feature: domain Description: GIIM Note: maturase Location: 23035-23245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FhuE (COG4773), RVT-GII, GIIM (pfam08388)