myRT

myRT report for GCA_002750945.2_ASM275094v2

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Seq: PEJY02000134.1 Enterococcus faecium strain ET14_17 NODE_134_length_3421_cov_105.338_ID_267, whole genome shotgun sequence (3421 bp)
Overview 1 RT 1: 63-3322 bp Neighborhood of RT #1 [63, 3321] RVT-AbiP2 HsdM Feature: gene Location: 63-1538 bp Ori: PJO05789.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 411-876 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 41 1 -876 bp Feature: gene Location: 1876-3321 bp Feature: domain Description: HsdM Location: 1897-3322 bp Feature: domain Description: HsdM Location: 1 897-3322 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: PEJY02000150.1 Enterococcus faecium strain ET14_17 NODE_150_length_2761_cov_83.7483_ID_299, whole genome shotgun sequence (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Ori: PJO05757.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2 347-2 512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: PEJY02000152.1 Enterococcus faecium strain ET14_17 NODE_152_length_2682_cov_121.344_ID_303, whole genome shotgun sequence (2682 bp)
Overview 1 RT 1: 745-2682 bp Neighborhood of RT #1 [745, 2682] RVT-GII Feature: gene Location: 745-2571 bp Ori: PJO05753.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1744 bp Feature: gene Location: 2594-2682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PEJY02000148.1 Enterococcus faecium strain ET14_17 NODE_148_length_2816_cov_93.5252_ID_295, whole genome shotgun sequence (2816 bp)
Overview 1 RT 1: 152-1925 bp Neighborhood of RT #1 [152, 2068] RVT-GII HNH_4 Feature: gene Location: 152-2068 bp Ori: PJO05760.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491-1226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 91-1226 bp Feature: domain Description: HNH_4 Location: 1820-1925 bp Feature: domain Description: HNH_4 Location: 1820-1925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNH_4 (pfam13395)

Seq: PEJY02000167.1 Enterococcus faecium strain ET14_17 NODE_167_length_1903_cov_240.631_ID_333, whole genome shotgun sequence (1903 bp)
Overview 1 RT 1: 77-1286 bp Neighborhood of RT #1 [77, 1465] RVT-GII GIIM Feature: gene Location: 77-1465 bp Ori: PJO05714.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1013 bp Feature: domain Description: GIIM Note: maturase Location: 1070-1286 bp Feature: domain Description: GIIM Note: maturase Location: 1070-1286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)