myRT

myRT report for GCA_002751055.2_ASM275105v2

Download annotations/find similar RTs

Seq: PEJX02000142.1 Enterococcus faecium strain ET13_17 NODE_142_length_3421_cov_126.513_ID_283, whole genome shotgun sequence (3421 bp)
Overview 1 RT 1: 63-3322 bp Neighborhood of RT #1 [63, 3321] RVT-AbiP2 HsdM Feature: gene Location: 63-1538 bp Ori: PJO02989.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 411-876 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 41 1 -876 bp Feature: gene Location: 1876-3321 bp Feature: domain Description: HsdM Location: 1897-3322 bp Feature: domain Description: HsdM Location: 1 897-3322 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: PEJX02000145.1 Enterococcus faecium strain ET13_17 NODE_145_length_3390_cov_93.8788_ID_289, whole genome shotgun sequence (3390 bp)
Overview 1 RT 1: 1-2529 bp Neighborhood of RT #1 [1, 2672] TraG-D_C RVT-GII HNH_4 Feature: gene Location: 1-639 bp Feature: domain Description: TraG-D_C Location: 4-319 bp Feature: domain Description: TraG-D_C Location: 4-319 bp Feature: gene Location: 756-2672 bp Ori: PJO02984.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1095-1830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1095-1830 bp Feature: domain Description: HNH_4 Location: 2424-2529 bp Feature: domain Description: HNH_4 Location: 2 42 4-2 52 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT-GII, HNH_4 (pfam13395)

Seq: PEJX02000154.1 Enterococcus faecium strain ET13_17 NODE_154_length_2761_cov_95.3366_ID_307, whole genome shotgun sequence (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Ori: PJO02957.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 23 47-2512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: PEJX02000177.1 Enterococcus faecium strain ET13_17 NODE_177_length_1696_cov_172.11_ID_353, whole genome shotgun sequence (1696 bp)
Overview 1 RT 1: 1-952 bp Neighborhood of RT #1 [1, 952] RVT-GII Feature: gene Location: 1-952 bp Ori: PJO02899.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PEJX02000174.1 Enterococcus faecium strain ET13_17 NODE_174_length_1903_cov_276.013_ID_347, whole genome shotgun sequence (1903 bp)
Overview 1 RT 1: 77-1286 bp Neighborhood of RT #1 [77, 1465] RVT-GII GIIM Feature: gene Location: 77-1465 bp Ori: PJO02901.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1013 bp Feature: domain Description: GIIM Note: maturase Location: 1070-1286 bp Feature: domain Description: GIIM Note: maturase Location: 1070-1286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)