myRT

myRT report for GCA_002751905.1_ASM275190v1

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Seq: MNBJ01000020.1 Klebsiella quasipneumoniae strain CHKP0062 plasmid unnamed pSC0004, whole genome shotgun sequence (60731 bp)
Overview 1 RT 1: 27-3229 bp Neighborhood of RT #1 [27, 3243] RVT-GII PRK10276 umuC Feature: gene Location: 27-1481 bp Ori: PII43727.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399-1089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399-1 089 bp Feature: gene Location: 1556-1990 bp Ori: PII43656.1 Feature: domain Description: PRK10276 Location: 1595-1970 bp Feature: domain Description: PRK1 0276 Location: 1 595-1 970 bp Feature: gene Location: 1939-3243 bp Ori: PII43657.1 Feature: domain Description: umuC Location: 1984-3229 bp Feature: domain Description: umuC Location: 1 984-3229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: MNBJ01000026.1 Klebsiella quasipneumoniae strain CHKP0062 plasmid unnamed pSC0010, whole genome shotgun sequence (4490 bp)
Overview 1 RT 1: 27-2889 bp Neighborhood of RT #1 [27, 2891] RVT-GII Antirestrict Feature: gene Location: 27-1481 bp Ori: PII43607.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399-1089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399-1089 bp Feature: gene Location: 1715-1945 bp Feature: gene Location: 2466-2891 bp Ori: PII43605.1 Feature: domain Description: Antirestrict Location: 2601-2889 bp Feature: domain Description: Antirestrict Location: 2 601-2 889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Antirestrict (pfam03230)

Seq: MNBJ01000016.1 Klebsiella quasipneumoniae strain CHKP0062 SC0017, whole genome shotgun sequence (5336207 bp)
Overview 1 RT 1: 4995887-5000781 bp Neighborhood of RT #1 [4995887, 5000792] PRK09678 Psu RVT-UG17 SLATT_5 PRK09692 Feature: gene Location: 4995887-4996132 bp Ori: PII48327.1 Feature: domain Description: PRK09678 Location: 4995890-4996055 bp Feature: domain Description: PRK09678 Location: 4995890-4996055 bp Feature: gene Location: 4996150-4996716 bp Ori: PII48328.1 Feature: domain Description: Psu Location: 4996168-4996708 bp Feature: domain Description: Psu Location: 4996168-4996708 bp Feature: gene Location: 4997356-4998765 bp Ori: PII48822.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4997593-4998205 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4997593 -4998205 bp Feature: gene Location: 4998959-4999600 bp Ori: PII48823.1 Feature: domain Description: SLATT_5 Location: 4998962-4999568 bp Feature: domain Description: SLATT_5 Location: 4998962-4999568 bp Feature: gene Location: 4999614-5000792 bp Ori: PII48329.1 Feature: domain Description: PRK09692 Location: 4999623-5000781 bp Feature: domain Description: PRK09692 Location: 4999623 -5000781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), Psu (pfam07455), RVT-UG17, SLATT_5 (pfam18160), PRK09692 (Integrase; provisional)