myRT

myRT report for GCA_002752025.1_ASM275202v1

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Seq: MNKY01000003.1 Erwinia sp. OLMDSP33 NODE_14_length_82930_cov_32.5633_ID_27, whole genome shotgun sequence (82933 bp)
Overview 1 RT 1: 73783-82520 bp Neighborhood of RT #1 [73783, 82588] PRK10995 RVT-UG4 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 LysM IAT_beta Invasin_D3 Invasin_D3 Invasin_D3 Feature: gene Location: 73783-74451 bp Ori: PIJ88742.1 Feature: domain Description: PRK10995 Location: 73786-74440 bp Feature: domain Description: PRK1 0995 Location: 73786-74440 bp Feature: gene Location: 74814-75131 bp Feature: gene Location: 75126-75422 bp Ori: PIJ88744.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 75129-75282 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 751 29-75282 bp Feature: gene Location: 75666-79916 bp Ori: PIJ88745.1 Feature: domain Description: Invasin_D3 Location: 75672-75933 bp Feature: domain Description: Invasin_D3 Location: 75672-75933 bp Feature: domain Description: Invasin_D3 Location: 75960-76230 bp Feature: domain Description: Invasin_D3 Location: 75960-76230 bp Feature: domain Description: Invasin_D3 Location: 76308-76641 bp Feature: domain Description: Invasin_D3 Location: 76308-76641 bp Feature: domain Description: Invasin_D3 Location: 76659-76989 bp Feature: domain Description: Invasin_D3 Location: 76659-76989 bp Feature: domain Description: Invasin_D3 Location: 77016-77319 bp Feature: domain Description: Invasin_D3 Location: 7701 6-7731 9 bp Feature: domain Description: Invasin_D3 Location: 77355-77637 bp Feature: domain Description: Invasin_D3 Location: 77355-77637 bp Feature: domain Description: Invasin_D3 Location: 77664-77937 bp Feature: domain Description: Invasin_D3 Location: 77664-77937 bp Feature: domain Description: Invasin_D3 Location: 78039-78285 bp Feature: domain Description: Invasin_D3 Location: 78039-78285 bp Feature: domain Description: Invasin_D3 Location: 78333-78579 bp Feature: domain Description: Invasin_D3 Location: 78333-78579 bp Feature: domain Description: Invasin_D3 Location: 78675-78936 bp Feature: domain Description: Invasin_D3 Location: 78675-78936 bp Feature: domain Description: Invasin_D3 Location: 78987-79260 bp Feature: domain Description: Invasin_D3 Location: 78987-79260 bp Feature: domain Description: Invasin_D3 Location: 79290-79512 bp Feature: domain Description: Invasin_D3 Location: 79290-7951 2 bp Feature: gene Location: 79913-82588 bp Ori: PIJ88746.1 Feature: domain Description: LysM Location: 80096-80234 bp Feature: domain Description: LysM Location: 80096-80234 bp Feature: domain Description: IAT_beta Location: 80333-81152 bp Feature: domain Description: IAT_beta Location: 80333-81 1 52 bp Feature: domain Description: Invasin_D3 Location: 81488-81794 bp Feature: domain Description: Invasin_D3 Location: 81 488-81 794 bp Feature: domain Description: Invasin_D3 Location: 81836-82148 bp Feature: domain Description: Invasin_D3 Location: 81 836-821 48 bp Feature: domain Description: Invasin_D3 Location: 82169-82520 bp Feature: domain Description: Invasin_D3 Location: 821 69-82520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10995 (MarC family NAAT transporter), RVT-UG4, Invasin_D3 (pfam09134), LysM (smart00257), IAT_beta (pfam11924)

Seq: MNKY01000016.1 Erwinia sp. OLMDSP33 NODE_5_length_161490_cov_31.5781_ID_9, whole genome shotgun sequence (161490 bp)
Overview 1 RT 1: 5948-12621 bp Neighborhood of RT #1 [5948, 12734] WecH FimA RVT-UG4 FimD FimC Feature: gene Location: 5948-6940 bp Ori: PIJ86871.1 Feature: domain Description: WecH Location: 5951-6938 bp Feature: domain Description: WecH Location: 5951-6938 bp Feature: gene Location: 7388-8896 bp Ori: PIJ86872.1 Feature: domain Description: FimA Location: 8561-8876 bp Feature: domain Description: FimA Location: 8561-8876 bp Feature: gene Location: 8893-9258 bp Ori: PIJ86873.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 8896-9172 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 8896-9172 bp Feature: gene Location: 9301-11883 bp Ori: PIJ86874.1 Feature: domain Description: FimD Location: 9331-11881 bp Feature: domain Description: FimD Location: 9331-11881 bp Feature: gene Location: 11883-12734 bp Ori: PIJ86875.1 Feature: domain Description: FimC Location: 11910-12621 bp Feature: domain Description: FimC Location: 11910-12 62 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WecH (COG3274), FimA (pfam16970), RVT-UG4, FimD (COG3188), FimC (COG3121)