myRT

myRT report for GCA_002752075.1_ASM275207v1

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Seq: MOMA01000025.1 Erwinia sp. OLTSP20 NODE_3_length_159306_cov_16.6767_ID_5, whole genome shotgun sequence (159306 bp)
Overview 1 RT 1: 3697-10370 bp Neighborhood of RT #1 [3697, 10483] WecH FimA RVT-UG4 FimD FimC Feature: gene Location: 3697-4689 bp Ori: PIJ92455.1 Feature: domain Description: WecH Location: 3700-4687 bp Feature: domain Description: WecH Location: 3700-4687 bp Feature: gene Location: 5137-6645 bp Ori: PIJ92456.1 Feature: domain Description: FimA Location: 6310-6625 bp Feature: domain Description: FimA Location: 631 0-6625 bp Feature: gene Location: 6642-7007 bp Ori: PIJ92457.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6645-6921 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6645-6921 bp Feature: gene Location: 7050-9632 bp Ori: PIJ92458.1 Feature: domain Description: FimD Location: 7080-9630 bp Feature: domain Description: FimD Location: 7080-9630 bp Feature: gene Location: 9632-10483 bp Ori: PIJ92459.1 Feature: domain Description: FimC Location: 9659-10370 bp Feature: domain Description: FimC Location: 9659-1 0370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WecH (COG3274), FimA (pfam16970), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: MOMA01000011.1 Erwinia sp. OLTSP20 NODE_8_length_110015_cov_16.8269_ID_15, whole genome shotgun sequence (110015 bp)
Overview 1 RT 1: 73835-82572 bp Neighborhood of RT #1 [73835, 82640] PRK10995 RVT-UG4 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 LysM IAT_beta Invasin_D3 Invasin_D3 Invasin_D3 Feature: gene Location: 73835-74503 bp Ori: PIJ93988.1 Feature: domain Description: PRK10995 Location: 73838-74492 bp Feature: domain Description: PRK10995 Location: 73838-74492 bp Feature: gene Location: 74866-75183 bp Feature: gene Location: 75178-75474 bp Ori: PIJ93990.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 75181-75334 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 75181-75334 bp Feature: gene Location: 75718-79968 bp Ori: PIJ93991.1 Feature: domain Description: Invasin_D3 Location: 75724-75985 bp Feature: domain Description: Invasin_D3 Location: 7572 4-75985 bp Feature: domain Description: Invasin_D3 Location: 76012-76282 bp Feature: domain Description: Invasin_D3 Location: 76012 -762 82 bp Feature: domain Description: Invasin_D3 Location: 76360-76693 bp Feature: domain Description: Invasin_D3 Location: 76360-76693 bp Feature: domain Description: Invasin_D3 Location: 76711-77041 bp Feature: domain Description: Invasin_D3 Location: 76711-77041 bp Feature: domain Description: Invasin_D3 Location: 77068-77371 bp Feature: domain Description: Invasin_D3 Location: 77068-77371 bp Feature: domain Description: Invasin_D3 Location: 77407-77689 bp Feature: domain Description: Invasin_D3 Location: 77407-77689 bp Feature: domain Description: Invasin_D3 Location: 77716-77989 bp Feature: domain Description: Invasin_D3 Location: 77716-77989 bp Feature: domain Description: Invasin_D3 Location: 78091-78337 bp Feature: domain Description: Invasin_D3 Location: 78091-78337 bp Feature: domain Description: Invasin_D3 Location: 78385-78631 bp Feature: domain Description: Invasin_D3 Location: 78385-78631 bp Feature: domain Description: Invasin_D3 Location: 78727-78988 bp Feature: domain Description: Invasin_D3 Location: 7872 7-78988 bp Feature: domain Description: Invasin_D3 Location: 79039-79312 bp Feature: domain Description: Invasin_D3 Location: 79039-79312 bp Feature: domain Description: Invasin_D3 Location: 79342-79564 bp Feature: domain Description: Invasin_D3 Location: 79342 -79564 bp Feature: gene Location: 79965-82640 bp Ori: PIJ93992.1 Feature: domain Description: LysM Location: 80148-80286 bp Feature: domain Description: LysM Location: 80148-802 86 bp Feature: domain Description: IAT_beta Location: 80385-81204 bp Feature: domain Description: IAT_beta Location: 80385-812 04 bp Feature: domain Description: Invasin_D3 Location: 81540-81846 bp Feature: domain Description: Invasin_D3 Location: 81540-81846 bp Feature: domain Description: Invasin_D3 Location: 81888-82200 bp Feature: domain Description: Invasin_D3 Location: 81888-82 2 00 bp Feature: domain Description: Invasin_D3 Location: 82221-82572 bp Feature: domain Description: Invasin_D3 Location: 82 2 2 1-82 572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10995 (MarC family NAAT transporter), RVT-UG4, Invasin_D3 (pfam09134), LysM (smart00257), IAT_beta (pfam11924)