myRT

myRT report for GCA_002752165.1_ASM275216v1

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Seq: MOMB01000054.1 Erwinia sp. OLFS4 NODE_14_length_82982_cov_53.0189_ID_27, whole genome shotgun sequence (82982 bp)
Overview 1 RT 1: 73835-82572 bp Neighborhood of RT #1 [73835, 82640] PRK10995 RVT-UG4 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 LysM IAT_beta Invasin_D3 Invasin_D3 Invasin_D3 Feature: gene Location: 73835-74503 bp Ori: PIJ90338.1 Feature: domain Description: PRK10995 Location: 73838-74492 bp Feature: domain Description: PRK1 0995 Location: 73838-74492 bp Feature: gene Location: 74866-75183 bp Feature: gene Location: 75178-75474 bp Ori: PIJ90340.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 75181-75334 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 751 81 -75334 bp Feature: gene Location: 75718-79968 bp Ori: PIJ90341.1 Feature: domain Description: Invasin_D3 Location: 75724-75985 bp Feature: domain Description: Invasin_D3 Location: 75724-75985 bp Feature: domain Description: Invasin_D3 Location: 76012-76282 bp Feature: domain Description: Invasin_D3 Location: 7601 2-76282 bp Feature: domain Description: Invasin_D3 Location: 76360-76693 bp Feature: domain Description: Invasin_D3 Location: 76360-76693 bp Feature: domain Description: Invasin_D3 Location: 76711-77041 bp Feature: domain Description: Invasin_D3 Location: 7671 1 -77041 bp Feature: domain Description: Invasin_D3 Location: 77068-77371 bp Feature: domain Description: Invasin_D3 Location: 77068-77371 bp Feature: domain Description: Invasin_D3 Location: 77407-77689 bp Feature: domain Description: Invasin_D3 Location: 77407-77689 bp Feature: domain Description: Invasin_D3 Location: 77716-77989 bp Feature: domain Description: Invasin_D3 Location: 7771 6-77989 bp Feature: domain Description: Invasin_D3 Location: 78091-78337 bp Feature: domain Description: Invasin_D3 Location: 78091 -78337 bp Feature: domain Description: Invasin_D3 Location: 78385-78631 bp Feature: domain Description: Invasin_D3 Location: 78385-78631 bp Feature: domain Description: Invasin_D3 Location: 78727-78988 bp Feature: domain Description: Invasin_D3 Location: 78727-78988 bp Feature: domain Description: Invasin_D3 Location: 79039-79312 bp Feature: domain Description: Invasin_D3 Location: 79039-7931 2 bp Feature: domain Description: Invasin_D3 Location: 79342-79564 bp Feature: domain Description: Invasin_D3 Location: 79342-79564 bp Feature: gene Location: 79965-82640 bp Ori: PIJ90342.1 Feature: domain Description: LysM Location: 80148-80286 bp Feature: domain Description: LysM Location: 801 48-80286 bp Feature: domain Description: IAT_beta Location: 80385-81204 bp Feature: domain Description: IAT_beta Location: 80385-81 204 bp Feature: domain Description: Invasin_D3 Location: 81540-81846 bp Feature: domain Description: Invasin_D3 Location: 81 540-81 846 bp Feature: domain Description: Invasin_D3 Location: 81888-82200 bp Feature: domain Description: Invasin_D3 Location: 81 888-82200 bp Feature: domain Description: Invasin_D3 Location: 82221-82572 bp Feature: domain Description: Invasin_D3 Location: 82221 -82572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10995 (MarC family NAAT transporter), RVT-UG4, Invasin_D3 (pfam09134), LysM (smart00257), IAT_beta (pfam11924)

Seq: MOMB01000049.1 Erwinia sp. OLFS4 NODE_5_length_161618_cov_51.3407_ID_9, whole genome shotgun sequence (161618 bp)
Overview 1 RT 1: 6009-12682 bp Neighborhood of RT #1 [6009, 12795] WecH FimA RVT-UG4 FimD FimC Feature: gene Location: 6009-7001 bp Ori: PIJ90966.1 Feature: domain Description: WecH Location: 6012-6999 bp Feature: domain Description: WecH Location: 6012 -6999 bp Feature: gene Location: 7449-8957 bp Ori: PIJ90967.1 Feature: domain Description: FimA Location: 8622-8937 bp Feature: domain Description: FimA Location: 862 2 -8937 bp Feature: gene Location: 8954-9319 bp Ori: PIJ90968.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 8957-9233 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 8957-92 33 bp Feature: gene Location: 9362-11944 bp Ori: PIJ90969.1 Feature: domain Description: FimD Location: 9392-11942 bp Feature: domain Description: FimD Location: 9392 -11942 bp Feature: gene Location: 11944-12795 bp Ori: PIJ90970.1 Feature: domain Description: FimC Location: 11971-12682 bp Feature: domain Description: FimC Location: 11971-12 682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WecH (COG3274), FimA (pfam16970), RVT-UG4, FimD (COG3188), FimC (COG3121)