myRT

myRT report for GCA_002753515.1_ASM275351v1

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Seq: PEAK01000077.1 Magnetococcales bacterium isolate HA3dbin1 scaffold140, whole genome shotgun sequence (17601 bp)
Overview 1 RT 1: 14195-17491 bp Neighborhood of RT #1 [14195, 17598] nifA nifA RVT-GII GIIM Feature: gene Location: 14195-15787 bp Feature: domain Description: nifA Location: 14279-15581 bp Feature: domain Description: nifA Location: 1 4279-1 5581 bp Feature: domain Description: nifA Location: 15626-15785 bp Feature: domain Description: nifA Location: 1 5626-1 5785 bp Feature: gene Location: 16002-16451 bp Feature: gene Location: 16768-17598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16774-17227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6774-1 7227 bp Feature: domain Description: GIIM Note: maturase Location: 17278-17491 bp Feature: domain Description: GIIM Note: maturase Location: 1 7278-1 7491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nifA (TIGR01817), RVT-GII, GIIM (pfam08388)

Seq: PEAK01000005.1 Magnetococcales bacterium isolate HA3dbin1 scaffold6, whole genome shotgun sequence (115166 bp)
Overview 1 RT 1: 57511-65306 bp Neighborhood of RT #1 [57511, 65308] RVT-DGRs TIR_2 COG5635 TIR_2 YfmG glyS Feature: gene Location: 57511-57858 bp Feature: gene Location: 58039-58353 bp Feature: gene Location: 58352-59344 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 58559-59210 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 58559-592 10 bp Feature: gene Location: 59761-63186 bp Feature: domain Description: TIR_2 Location: 59794-60121 bp Feature: domain Description: TIR_2 Location: 59794-6012 1 bp Feature: domain Description: COG5635 Location: 60547-61645 bp Feature: domain Description: COG5635 Location: 60547-61645 bp Feature: domain Description: TIR_2 Location: 61972-62308 bp Feature: domain Description: TIR_2 Location: 61972 -62 308 bp Feature: domain Description: YfmG Location: 62455-63163 bp Feature: domain Description: YfmG Location: 62 455-63163 bp Feature: gene Location: 63215-65308 bp Feature: domain Description: glyS Location: 63227-65306 bp Feature: domain Description: glyS Location: 632 2 7-65306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, TIR_2 (pfam13676), COG5635 (Predicted NTPase, NACHT family domain ), YfmG (COG1262), glyS (TIGR00211)