myRT

myRT report for GCA_002753725.1_ASM275372v1

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Seq: PEAL01000147.1 Deltaproteobacteria bacterium isolate ER2bin7 scaffold1053, whole genome shotgun sequence (11882 bp)
Overview 1 RT 1: 2-5027 bp Neighborhood of RT #1 [2, 5032] RVT-GII GIIM mltD mltD PRK09245 Feature: gene Location: 2-130 bp Feature: gene Location: 192-1142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198-789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 98-789 bp Feature: domain Description: GIIM Note: maturase Location: 867-1056 bp Feature: domain Description: GIIM Note: maturase Location: 867-1 056 bp Feature: gene Location: 2049-3944 bp Feature: domain Description: mltD Location: 2625-3582 bp Feature: domain Description: mltD Location: 2625-3582 bp Feature: domain Description: mltD Location: 3612-3930 bp Feature: domain Description: mltD Location: 361 2-3930 bp Feature: gene Location: 4229-5032 bp Feature: domain Description: PRK09245 Location: 4247-5027 bp Feature: domain Description: PRK09245 Location: 4247-5027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), mltD (PRK10783), PRK09245 (crotonase/enoyl-CoA hydratase family protein)

Seq: PEAL01000149.1 Deltaproteobacteria bacterium isolate ER2bin7 scaffold1057, whole genome shotgun sequence (11866 bp)
Overview 1 RT 1: 2662-4678 bp Neighborhood of RT #1 [2662, 4842] RVT-CRISPR Cas2_I_II_III CRISPR_Cas2 Feature: gene Location: 2662-2826 bp Feature: gene Location: 2828-3310 bp Feature: gene Location: 3328-4176 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3532-4132 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3532 -4132 bp Feature: gene Location: 4181-4471 bp Feature: domain Description: Cas2_I_II_III Location: 4202-4406 bp Feature: domain Description: Cas2 _I_II_III Location: 42 02 -4406 bp Feature: gene Location: 4489-4842 bp Feature: domain Description: CRISPR_Cas2 Location: 4492-4678 bp Feature: domain Description: CRISPR_Cas2 Location: 4492 -4678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas2_I_II_III (cl11442), CRISPR_Cas2 (pfam09827)

Seq: PEAL01000152.1 Deltaproteobacteria bacterium isolate ER2bin7 scaffold1081, whole genome shotgun sequence (11722 bp)
Overview 1 RT 1: 362-3003 bp Neighborhood of RT #1 [362, 3003] COG1373 RVT-CRISPR-like Feature: gene Location: 362-1669 bp Feature: domain Description: COG1373 Location: 368-1559 bp Feature: domain Description: COG13 73 Location: 3 68-1559 bp Feature: gene Location: 1827-2303 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2034-2289 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 203 4-2289 bp Feature: gene Location: 2309-2485 bp Feature: gene Location: 2521-3003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-CRISPR

Seq: PEAL01000039.1 Deltaproteobacteria bacterium isolate ER2bin7 scaffold215, whole genome shotgun sequence (25212 bp)
Overview 1 RT 1: 5500-9343 bp Neighborhood of RT #1 [5500, 9642] RVT_N RVT-GII HNH Sigma70_r4 Feature: gene Location: 5500-5664 bp Feature: gene Location: 6010-6189 bp Feature: gene Location: 6790-7512 bp Feature: domain Description: RVT_N Location: 6844-7087 bp Feature: domain Description: RVT_N Location: 684 4 -7087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7132-7360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7132-7360 bp Feature: domain Description: HNH Note: nucleases Location: 7366-7471 bp Feature: domain Description: HNH Note: nucleases Location: 7366-74 71 bp Feature: gene Location: 7743-7892 bp Feature: gene Location: 8497-9642 bp Feature: domain Description: Sigma70_r4 Location: 9223-9343 bp Feature: domain Description: Sigma70_r4 Location: 9223-934 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, HNH (pfam01844), Sigma70_r4 (pfam04545)

Seq: PEAL01000311.1 Deltaproteobacteria bacterium isolate ER2bin7 scaffold2594, whole genome shotgun sequence (6401 bp)
Overview 1 RT 1: 186-6161 bp Neighborhood of RT #1 [186, 6161] CarboxypepD_reg CarboxypepD_reg CarboxypepD_reg CarboxypepD_reg BACON RVT-DGRs Avd_like Feature: gene Location: 186-4154 bp Feature: domain Description: CarboxypepD_reg Location: 603-711 bp Feature: domain Description: CarboxypepD_reg Location: 603-711 bp Feature: domain Description: CarboxypepD_reg Location: 849-1014 bp Feature: domain Description: CarboxypepD_reg Location: 849-1014 bp Feature: domain Description: CarboxypepD_reg Location: 1347-1458 bp Feature: domain Description: CarboxypepD_reg Location: 1347-145 8 bp Feature: domain Description: CarboxypepD_reg Location: 1587-1710 bp Feature: domain Description: CarboxypepD_reg Location: 15 87-1710 bp Feature: domain Description: BACON Location: 1845-2091 bp Feature: domain Description: BACON Location: 1845 -2091 bp Feature: gene Location: 4524-5525 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4725-5325 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4725 -5 325 bp Feature: gene Location: 5531-5887 bp Feature: domain Description: Avd_like Location: 5564-5870 bp Feature: domain Description: Avd_like Location: 5 5 64-5 870 bp Feature: gene Location: 5940-6161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CarboxypepD_reg (pfam13620), BACON (pfam13004), RVT-DGRs, Avd_like (cd16376)

Seq: PEAL01000432.1 Deltaproteobacteria bacterium isolate ER2bin7 scaffold3804, whole genome shotgun sequence (4533 bp)
Overview 1 RT 1: 1-4439 bp Neighborhood of RT #1 [1, 4453] YfmG HRDC RVT-DGRs TIR_2 MFS_1 YfmG Feature: gene Location: 1-660 bp Feature: domain Description: YfmG Location: 43-646 bp Feature: domain Description: YfmG Location: 43-6 46 bp Feature: gene Location: 856-1332 bp Feature: domain Description: HRDC Location: 1108-1303 bp Feature: domain Description: HRDC Location: 1108-1303 bp Feature: gene Location: 1341-2345 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1548-2139 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1548-2139 bp Feature: gene Location: 2361-2609 bp Feature: gene Location: 2630-4453 bp Feature: domain Description: TIR_2 Location: 2660-2951 bp Feature: domain Description: TIR_2 Location: 26 6 0-2951 bp Feature: domain Description: MFS_1 Location: 3122-3461 bp Feature: domain Description: MFS_1 Location: 3122-346 1 bp Feature: domain Description: YfmG Location: 3734-4439 bp Feature: domain Description: YfmG Location: 3734-4439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), HRDC (smart00341), RVT-DGRs, TIR_2 (pfam13676), MFS_1 (pfam07690)

Seq: PEAL01000543.1 Deltaproteobacteria bacterium isolate ER2bin7 scaffold5249, whole genome shotgun sequence (3296 bp)
Overview 1 RT 1: 1-1866 bp Neighborhood of RT #1 [1, 2048] YsdA RVT-CRISPR Cas2_I_II_III CRISPR_Cas2 Feature: gene Location: 1-390 bp Feature: domain Description: YsdA Location: 58-298 bp Feature: domain Description: YsdA Location: 58-298 bp Feature: gene Location: 387-602 bp Feature: gene Location: 738-1223 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 741-1194 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 7 41-1194 bp Feature: gene Location: 1267-1584 bp Feature: domain Description: Cas2_I_II_III Location: 1288-1489 bp Feature: domain Description: Cas2_I_II_III Location: 1288-1489 bp Feature: gene Location: 1653-2048 bp Feature: domain Description: CRISPR_Cas2 Location: 1671-1866 bp Feature: domain Description: CRISPR_Cas2 Location: 167 1-1866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YsdA (COG3326), RVT-CRISPR, Cas2_I_II_III (cl11442), CRISPR_Cas2 (pfam09827)

Seq: PEAL01000087.1 Deltaproteobacteria bacterium isolate ER2bin7 scaffold527, whole genome shotgun sequence (17057 bp)
Overview 1 RT 1: 277-9577 bp Neighborhood of RT #1 [277, 10929] HRDC RVT-DGRs COG1373 tand_rpt_95 tand_rpt_95 Peptidase_C13 CarboxypepD_reg tand_rpt_95 CarboxypepD_reg tand_rpt_95 Peptidase_C13 Feature: gene Location: 277-819 bp Feature: domain Description: HRDC Location: 547-745 bp Feature: domain Description: HRDC Location: 547-745 bp Feature: gene Location: 865-2049 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1075-1663 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1075-1663 bp Feature: gene Location: 2152-3447 bp Feature: domain Description: COG1373 Location: 2245-3442 bp Feature: domain Description: COG1373 Location: 2245-3442 bp Feature: gene Location: 3607-10929 bp Feature: domain Description: tand_rpt_95 Location: 4354-4624 bp Feature: domain Description: tand_rpt_95 Location: 4354-4624 bp Feature: domain Description: tand_rpt_95 Location: 4648-4903 bp Feature: domain Description: tand_rpt_95 Location: 4648 -4903 bp Feature: domain Description: Peptidase_C13 Location: 5449-5671 bp Feature: domain Description: Peptidase_C13 Location: 5449-5671 bp Feature: domain Description: CarboxypepD_reg Location: 6985-7213 bp Feature: domain Description: CarboxypepD_reg Location: 698 5-7213 bp Feature: domain Description: tand_rpt_95 Location: 7471-7723 bp Feature: domain Description: tand_rpt_95 Location: 7471-7723 bp Feature: domain Description: CarboxypepD_reg Location: 8047-8269 bp Feature: domain Description: CarboxypepD_reg Location: 8 047-8 269 bp Feature: domain Description: tand_rpt_95 Location: 8527-8788 bp Feature: domain Description: tand_rpt_95 Location: 8 527-8 78 8 bp Feature: domain Description: Peptidase_C13 Location: 9319-9577 bp Feature: domain Description: Peptidase_C13 Location: 9319-9577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HRDC (smart00341), RVT-DGRs, COG1373 (Predicted ATPase, AAA+ superfamily ), tand_rpt_95 (NF012211), Peptidase_C13 (pfam01650), CarboxypepD_reg (pfam13620)

Seq: PEAL01000007.1 Deltaproteobacteria bacterium isolate ER2bin7 scaffold63, whole genome shotgun sequence (40428 bp)
Overview 1 RT 1: 23455-28151 bp Neighborhood of RT #1 [23455, 28151] RocR RVT_N RVT-GII GIIM HNH Feature: gene Location: 23455-24825 bp Feature: domain Description: RocR Location: 23479-24820 bp Feature: domain Description: RocR Location: 23479 -24820 bp Feature: gene Location: 25326-25493 bp Feature: gene Location: 25724-27403 bp Feature: domain Description: RVT_N Location: 25778-26021 bp Feature: domain Description: RVT_N Location: 25778-26021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26066-26690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26066-2669 0 bp Feature: domain Description: GIIM Note: maturase Location: 26744-26975 bp Feature: domain Description: GIIM Note: maturase Location: 26744-269 75 bp Feature: domain Description: HNH Note: nucleases Location: 27215-27353 bp Feature: domain Description: HNH Note: nucleases Location: 27215-27353 bp Feature: gene Location: 27523-27759 bp Feature: gene Location: 27843-28151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RocR (COG3829), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)