myRT

myRT report for GCA_002762285.1_ASM276228v1

Download annotations/find similar RTs

Seq: NXGR01000045.1 Candidatus Hodgkinia cicadicola strain MAGTCS contig_14253, whole genome shotgun sequence (2324 bp)
Overview 1 RT 1: 3-2322 bp Neighborhood of RT #1 [3, 2321] RVT-CRISPR-like PRK13034 Feature: gene Location: 3-179 bp Feature: gene Location: 607-933 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 742-901 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 742-901 bp Feature: gene Location: 2166-2321 bp Feature: domain Description: PRK13034 Location: 2169-2322 bp Feature: domain Description: PRK1 3034 Location: 21 69-2322 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, PRK13034 (serine hydroxymethyltransferase; Reviewed)

Seq: NXGR01000051.1 Candidatus Hodgkinia cicadicola strain MAGTCS contig_173, whole genome shotgun sequence (12933 bp)
Overview 1 RT 1: 1-4595 bp Neighborhood of RT #1 [1, 4762] rve RNase_HI_RT_Ty3 Integrase_H2C2 RVT-UNC RVT-UNC RT_RNaseH_2 KOG0987 Feature: gene Location: 1-300 bp Feature: domain Description: rve Location: 10-301 bp Feature: domain Description: rve Location: 10-301 bp Feature: gene Location: 302-853 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 317-401 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 317-401 bp Feature: domain Description: Integrase_H2C2 Location: 659-824 bp Feature: domain Description: Integrase_H2 C2 Location: 659-82 4 bp Feature: gene Location: 966-1412 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 990-1140 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 990-1140 bp Feature: gene Location: 1536-2564 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1572-1704 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1572 -1704 bp Feature: domain Description: RT_RNaseH_2 Location: 1920-2217 bp Feature: domain Description: RT_RNaseH_2 Location: 192 0-2 2 17 bp Feature: gene Location: 2816-3283 bp Feature: gene Location: 3605-4762 bp Feature: domain Description: KOG0987 Location: 3632-4595 bp Feature: domain Description: KOG0987 Location: 3632 -4595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), RVT-UG16/RVT-UG9/RVT-UG8/RVT-UG26(RVT-UNC), RVT-UG20/RVT-UG10/RVT-UG26/RVT-UG11(RVT-UNC), RT_RNaseH_2 (pfam17919), KOG0987 (KOG0987, DNA helicase PIF1/RRM3 )