myRT

myRT report for GCA_002762615.1_ASM276261v1

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Seq: PESZ01000219.1 Pseudomonas syringae pv. actinidiae strain MAFF212054 MAFF212054_flsh_rep_c248, whole genome shotgun sequence (2316 bp)
Overview 1 RT 1: 1-2316 bp Neighborhood of RT #1 [1, 2316] RVT-GII Feature: gene Location: 1-367 bp Feature: gene Location: 513-1668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 753-924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 753-924 bp Feature: gene Location: 2166-2316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PESZ01000225.1 Pseudomonas syringae pv. actinidiae strain MAFF212054 MAFF212054_flsh_rep_c254, whole genome shotgun sequence (2258 bp)
Overview 1 RT 1: 1-2207 bp Neighborhood of RT #1 [1, 2207] conj_conj_conj_TIGR03755 RVT-GII GIIM Feature: gene Location: 1-183 bp Ori: PIN57607.1 Feature: domain Description: conj_conj_conj_TIGR03755 Location: 7-133 bp Feature: domain Description: conj_conj_conj_TIGR03755 Location: 7-133 bp Feature: gene Location: 123-452 bp Feature: gene Location: 500-1867 bp Ori: PIN57608.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833-1448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833-1448 bp Feature: domain Description: GIIM Note: maturase Location: 1505-1733 bp Feature: domain Description: GIIM Note: maturase Location: 1505-1733 bp Feature: gene Location: 1961-2029 bp Feature: gene Location: 2064-2207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT conj_conj_conj_TIGR03755, RVT-GII, GIIM (pfam08388)

Seq: PESZ01000076.1 Pseudomonas syringae pv. actinidiae strain MAFF212054 MAFF212054_flsh_c76, whole genome shotgun sequence (65806 bp)
Overview 1 RT 1: 1-4801 bp Neighborhood of RT #1 [1, 4854] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-G2L4 LysR ALDH_F6_MMSDH Feature: gene Location: 1-276 bp Ori: PIN59387.1 Feature: domain Description: DDE_Tnp_IS66 Location: 4-115 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4-115 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 136-250 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 13 6-250 bp Feature: gene Location: 319-1305 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 538-1123 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 53 8-1123 bp Feature: gene Location: 2226-3170 bp Ori: PIN59388.1 Feature: domain Description: LysR Location: 2262-3114 bp Feature: domain Description: LysR Location: 2262-3 114 bp Feature: gene Location: 3328-4854 bp Ori: PIN59389.1 Gene: mmsA Feature: domain Description: ALDH_F6_MMSDH Location: 3373-4801 bp Feature: domain Description: ALDH_F6_MMSDH Location: 3 3 73 -4801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-G2L4, LysR (COG0583), ALDH_F6_MMSDH (cd07085)

Seq: PESZ01000227.1 Pseudomonas syringae pv. actinidiae strain MAFF212054 MAFF212054_flsh_rep_c256, whole genome shotgun sequence (671 bp)
Overview 1 RT 1: 1-664 bp Neighborhood of RT #1 [1, 671] RVT-GII Feature: gene Location: 1-671 bp Ori: PIN57606.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121-664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121-664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PESZ01000015.1 Pseudomonas syringae pv. actinidiae strain MAFF212054 MAFF212054_flsh_c15, whole genome shotgun sequence (146688 bp)
Overview 1 RT 1: 1-2621 bp Neighborhood of RT #1 [1, 2621] COG3666 RVT-GII GIIM Feature: gene Location: 1-401 bp Ori: PIN62459.1 Feature: domain Description: COG3666 Location: 13-400 bp Feature: domain Description: COG3666 Location: 13-400 bp Feature: gene Location: 668-2032 bp Ori: PIN62563.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1001-1613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1001-1613 bp Feature: domain Description: GIIM Note: maturase Location: 1670-1898 bp Feature: domain Description: GIIM Note: maturase Location: 1670-1898 bp Feature: gene Location: 2080-2409 bp Feature: gene Location: 2349-2621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3666 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: PESZ01000001.1 Pseudomonas syringae pv. actinidiae strain MAFF212054 MAFF212054_flsh_c1, whole genome shotgun sequence (64791 bp)
Overview 1 RT 1: 1-12485 bp Neighborhood of RT #1 [1, 12745] RVT-GII FhuE PRK12467 PRK12467 A_NRPS PRK12467 Feature: gene Location: 1-896 bp Ori: PIN63496.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-856 bp Feature: gene Location: 1582-3987 bp Ori: PIN63497.1 Feature: domain Description: FhuE Location: 1873-3985 bp Feature: domain Description: FhuE Location: 1873-3985 bp Feature: gene Location: 4124-12745 bp Ori: PIN63498.1 Feature: domain Description: PRK12467 Location: 4127-6959 bp Feature: domain Description: PRK1246 7 Location: 4127-6 959 bp Feature: domain Description: PRK12467 Location: 6974-10061 bp Feature: domain Description: PRK1246 7 Location: 6 974-1006 1 bp Feature: domain Description: A_NRPS Location: 10145-11585 bp Feature: domain Description: A_NRPS Location: 10145-11585 bp Feature: domain Description: PRK12467 Location: 11651-12485 bp Feature: domain Description: PRK1246 7 Location: 116 51-12485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, FhuE (COG4773), PRK12467 (peptide synthase; Provisional), A_NRPS (cd05930)